RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 LIPCP11150 499 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 CPMP14384 443 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 LIFP15018 202 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 NCK1P16333 377 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 CSNK2A2P19784 350 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 TCN2P20062 427 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 MAOAP21397 527 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 SLC6A2P23975 617 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 MPIP34949 423 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 FEN1P39748 380 aaKnown RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 EXT1Q16394 746 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 DCAF12L2Q5VW00 463 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 REP15Q6BDI9 236 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 BCL6BQ8N143 479 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 OR9K2Q8NGE7 335 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 OR4D6Q8NGJ1 314 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 ANGPTL6Q8NI99 470 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 CT55Q8WUE5 264 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 TSEN15Q8WW01 171 aaKnown RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 OR5P2Q8WZ92 322 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 GTF2H4Q92759 462 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 MCHR2Q969V1 340 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 CCDC115Q96NT0 180 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 AMDHD1Q96NU7 426 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 BBS4Q96RK4 519 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 SH3GL3Q99963 347 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 ALOXE3Q9BYJ1 711 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 VN1R1Q9GZP7 353 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 ZNF229Q9UJW7 825 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 NXT1Q9UKK6 140 aaKnown RBP4.69□□□□□ -1.66
VCAM1-202ENST00000347652 CFAP46Q8IYW2 2715 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 SCN2AQ99250 2005 aa4.69□□□□□ -1.66
VCAM1-202ENST00000347652 MYOCOSA0A1B0GUC4 107 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 C21orf140B9A014 251 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 H7C1Q1 480 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 CBX6O95503 412 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ATP1B1P05026 303 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 UMODP07911 640 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 HOXB9P17482 250 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TCEA1P23193 301 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 NTSP30990 170 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 RRM2P31350 389 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SLC1A3P43003 542 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 NCBP2P52298 156 aaKnown RBP eCLIP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EMP2P54851 167 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EEF1A1P68104 462 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 CXADRP78310 365 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ID2Q02363 134 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EEF1A2Q05639 463 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 STX4Q12846 297 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SERTAD2Q14140 314 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EEF1A1P5Q5VTE0 462 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TMEM205Q6UW68 189 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 DGAT2L6Q6ZPD8 337 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SHISA6Q6ZSJ9 500 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EIF3MQ7L2H7 374 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ANKRD46Q86W74 232 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ST13P4Q8IZP2 240 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 CLECL1Q8IZS7 167 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 LRRC25Q8N386 305 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 RNF148Q8N7C7 305 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 PHOSPHO1Q8TCT1 267 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TSLPQ969D9 159 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 PPWD1Q96BP3 646 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 C14orf79Q96F83 325 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ZBED6CLQ96FA7 236 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SLC41A3Q96GZ6 507 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ITCHQ96J02 903 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TAAR6Q96RI8 345 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SYT3Q9BQG1 590 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TRIM4Q9C037 500 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EFCAB1Q9HAE3 211 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 KLHL1Q9NR64 748 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ING3Q9NXR8 418 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 FARSAQ9Y285 508 aaKnown RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 TRAV25A0A0B4J276 109 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 IDSB3KWA1 339 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 SMLR1H3BR10 107 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 NKX2-8O15522 239 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ALOX12BO75342 701 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 BRI3O95415 125 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 C6orf47O95873 294 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 IFI6P09912 130 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 EFNA1P20827 205 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 CDKN2CP42773 168 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 HBA1P69905 142 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 THEM4Q5T1C6 240 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 PRAMEF5Q5TYX0 476 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 PRAMEF6Q5VXH4 476 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 CD276Q5ZPR3 534 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 DLEU7Q6UYE1 221 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ZNF551Q7Z340 670 aaPredicted RBP4.68□□□□□ -1.66
VCAM1-202ENST00000347652 ANKRD37Q7Z713 158 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 GPAT4Q86UL3 456 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 PRSS58Q8IYP2 241 aa4.68□□□□□ -1.66
VCAM1-202ENST00000347652 OR2Y1Q8NGV0 311 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms