RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 TMPRSS12Q86WS5 348 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 COL26A1Q96A83 441 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 HAVCR1Q96D42 359 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 CNRIP1Q96F85 164 aaPredicted RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 MRPL48Q96GC5 212 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 POFUT1Q9H488 388 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 MRPS30Q9NP92 439 aaKnown RBP14.11□□□□□ -0.15
LMNA-201ENST00000347559 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 FBXO4Q9UKT5 387 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 SLC35A3Q9Y2D2 325 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 MYOFQ9NZM1 2061 aa14.11□□□□□ -0.15
LMNA-201ENST00000347559 CENPVL1A0A0U1RR11 272 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OGG1O15527 345 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 RPP14O95059 124 aaKnown RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 AGTR1P30556 359 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ST8SIA6P61647 398 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ACTC1P68032 377 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ACTA1P68133 377 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ZNF234Q14588 700 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 TEAD2Q15562 447 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 PLEKHN1Q494U1 663 aaPredicted RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 UBE3DQ7Z6J8 389 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ARMC10Q8N2F6 343 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OR9A2Q8NGT5 310 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OR4K13Q8NH42 304 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 NR4A3Q92570 626 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ZNF334Q9HCZ1 680 aaPredicted RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 APMAPQ9HDC9 416 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 PRMT8Q9NR22 394 aaPredicted RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 CLDND1Q9NY35 253 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ICOSLGO75144 302 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 LEFTY1O75610 366 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 RCBTB2O95199 551 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 SNAPINO95295 136 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ASGR1P07306 291 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 RAB5BP61020 215 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OR7A5Q15622 319 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OR52E2Q8NGJ4 325 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 ADAMTS15Q8TE58 950 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 TMEM239Q8WW34 195 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 TCF7L1Q9HCS4 588 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 LSM7Q9UK45 103 aaKnown RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 Q9Y3F1 56 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 TBX19O60806 448 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 DUSP11O75319 330 aaKnown RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 CD3DP04234 171 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 CTSAP10619 480 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 F3P13726 295 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 TSC22D1Q15714 1073 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 PRRT3Q5FWE3 981 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 OR4C11Q6IEV9 310 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 LIN54Q6MZP7 749 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 FRRS1Q6ZNA5 592 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 CDK20Q8IZL9 346 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 GTPBP8Q8N3Z3 284 aaPredicted RBP14.1□□□□□ -0.15
LMNA-201ENST00000347559 OVCA2Q8WZ82 227 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 GAREM1Q9H706 876 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 SLC22A7Q9Y694 548 aa14.1□□□□□ -0.15
LMNA-201ENST00000347559 BCL2L11O43521 198 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 MAS1P04201 325 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 RAB40ALP0C0E4 278 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 SMIM6P0DI80 62 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 PTAFRP25105 342 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 MECP2P51608 486 aaKnown RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 MRPS10P82664 201 aaKnown RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 GLT8D1Q68CQ7 371 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 UQCC3Q6UW78 93 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 ZNF793Q6ZN11 406 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 KCNRGQ8N5I3 272 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 RAB40AQ8WXH6 277 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 BPIFA2Q96DR5 249 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 SLC25A13Q9UJS0 675 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 PCOLCE2Q9UKZ9 415 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 PLEKHA6Q9Y2H5 1048 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 A0A1B0GVT2 93 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 GREM1O60565 184 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 RNGTTO60942 597 aaKnown RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 ELFN1P0C7U0 828 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 LY6G6FQ5SQ64 297 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 DEFB132Q7Z7B7 95 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 NAA40Q86UY6 237 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 SLC16A11Q8NCK7 471 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 GRHL3Q8TE85 626 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 CNTNAP3BQ96NU0 1288 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 KLHL31Q9H511 634 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 C6orf106Q9H6K1 298 aaPredicted RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 ZNF443Q9Y2A4 671 aaPredicted RBP14.09□□□□□ -0.15
LMNA-201ENST00000347559 FAM96BQ9Y3D0 163 aa14.09□□□□□ -0.15
LMNA-201ENST00000347559 NPIPA5A0A0B4J1W7 369 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 NPIPA7E9PJI5 369 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 K7ESM1 405 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 POP7O75817 140 aaKnown RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 ANXA2P07355 339 aaKnown RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 NPIPA8P0DM63 369 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 AKR1C3P42330 323 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms