RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MSLNLQ96KJ4 702 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TRIB1Q96RU8 372 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 DEFB127Q9H1M4 99 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF355PQ9NSJ1 428 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SNX11Q9Y5W9 270 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 CASC3O15234 703 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 FURINP09958 794 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TNFRSF17Q02223 184 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 DBPQ10586 325 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 GPR139Q6DWJ6 353 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SFRP4Q6FHJ7 346 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TPRA1Q86W33 373 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 FAM46BQ96A09 425 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SLC41A3Q96GZ6 507 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 RANGRFQ9HD47 186 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 FXYD6-FXYD2A0A087WZ82 144 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF850A8MQ14 1090 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 H0YIV9 168 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF264O43296 627 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 LRRTM2O43300 516 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 PLRG1O43660 514 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 ADH7P40394 386 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 RBM39Q14498 530 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 SCGB2B2Q4G0G5 96 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 OR4K13Q8NH42 304 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 C16orf58Q96GQ5 468 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TREX2Q9BQ50 279 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 FXYD6Q9H0Q3 95 aa10.08□□□□□ -0.8
CLCN6-202ENST00000346436 DDX31Q9H8H2 851 aaKnown RBP10.08□□□□□ -0.8
CLCN6-202ENST00000346436 TRAPPC2LH3BP13 241 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 COX6B1P14854 86 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 TSFMP43897 325 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 KCNJ10P78508 379 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 IL11RAQ14626 422 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 HYAL4Q2M3T9 481 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 XAF1Q6GPH4 301 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 KLHL15Q96M94 604 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 USP36Q9P275 1121 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 OR6C76A6NM76 312 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 HCRTR1O43613 425 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 ARAFP10398 606 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 RPS25P62851 125 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 EIF2S3LQ2VIR3 472 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 C9orf152Q5JTZ5 239 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 AGAP6Q5VW22 663 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 NIPAL3Q6P499 406 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PAQR6Q6TCH4 344 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 ACBD7Q8N6N7 88 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 CSF3RQ99062 836 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 SEMA4GQ9NTN9 838 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 OR14I1A6ND48 311 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 H0Y8X5 98 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 LYRM1O43325 122 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 TSPAN9O75954 239 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 F10P00742 488 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PRR35P0CG20 571 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 CAPZBP47756 277 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 HTR5AP47898 357 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 NTRK2Q16620 822 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 MSRB3Q8IXL7 192 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 MED20Q9H944 212 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 KCNJ16Q9NPI9 418 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 MED16Q9Y2X0 877 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 METTL15A6NJ78 407 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 STK17BO94768 372 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PRKXP51817 358 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 ASB5Q8WWX0 329 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 EID2BQ96D98 161 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PDXPQ96GD0 296 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PINK1Q9BXM7 581 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PPIL3Q9H2H8 161 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 MEPEQ9NQ76 525 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PLEKHM1Q9Y4G2 1056 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 ANKRD33BA6NCL7 494 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 HTR3BO95264 441 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 POU2F2P09086 479 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 MAT1AQ00266 395 aaKnown RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 PGBD2Q6P3X8 592 aa10.07□□□□□ -0.8
CLCN6-202ENST00000346436 DPCDQ9BVM2 203 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-202ENST00000346436 SCGB1D2O95969 90 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ZDHHC11BP0C7U3 371 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CTGFP29279 349 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 OXA1LQ15070 435 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF683Q8IZ20 524 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 OR52E2Q8NGJ4 325 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 DEDD2Q8WXF8 326 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 CDS1Q92903 461 aa10.06□□□□□ -0.8
CLCN6-202ENST00000346436 SYT3Q9BQG1 590 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms