RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FAM122BQ7Z309 247 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NANOGNBQ7Z5D8 188 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GPALPP1Q8IXQ4 340 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GPR119Q8TDV5 335 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 DNAJA3Q96EY1 480 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 C4orf47A7E2U8 309 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 J3QLW9 94 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TBX1O43435 398 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 HIST1H2ABP04908 130 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CD8BP10966 210 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 APEHP13798 732 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZNF19P17023 458 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZNF28P17035 718 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NAA10P41227 235 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 DIO1P49895 249 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SLC26A5P58743 744 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LCN1P1Q5VSP4 162 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FAM69BQ5VUD6 431 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 C1QL3Q5VWW1 255 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LEG1Q6P5S2 330 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMEM205Q6UW68 189 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 HIST3H2AQ7L7L0 130 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MARCH9Q86YJ5 346 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RFLNBQ8N5W9 214 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 BMPERQ8N8U9 685 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 AGBL5Q8NDL9 886 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 HIST1H2ACQ93077 130 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SLC30A2Q9BRI3 323 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FKRPQ9H9S5 495 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PLEKHB1Q9UF11 243 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 EXPH5Q8NEV8 1989 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ALPK2Q86TB3 2170 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FUOMA2VDF0 154 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SLC25A12O75746 678 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SDHAP31040 664 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 COL28A1Q2UY09 1125 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR5M10Q6IEU7 315 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR6K6Q8NGW6 343 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR2T27Q8NH04 317 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NEIL3Q8TAT5 605 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SLC6A5Q9Y345 797 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TRAV36DV7A0A075B6V5 113 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMED7-TICAM2A0A0A6YYA0 188 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMEM221A6NGB7 291 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 M0R296 226 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CASKO14936 926 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 BGLAPP02818 100 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CCL4P13236 92 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GALP22466 123 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GTF2E2P29084 291 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 BCAP31P51572 246 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 POLR2HP52434 150 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TRA2AQ13595 282 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SLC35D3Q5M8T2 416 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ARL9Q6T311 187 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 JAZF1Q86VZ6 243 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ADGRG3Q86Y34 549 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LYSMD2Q8IV50 215 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LAX1Q8IWV1 398 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 FAM83FQ8NEG4 500 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR5L2Q8NGL0 311 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR8K3Q8NH51 312 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RXFP3Q9NSD7 469 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TAS2R10Q9NYW0 307 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 C19orf25Q9UFG5 118 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 POLHQ9Y253 713 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMED7Q9Y3B3 224 aa12.81□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 DVL2O14641 736 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PLPP2O43688 288 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SUSD5O60279 629 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GAAP10253 952 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PYCR1P32322 319 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CAV3P56539 151 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 E2F1Q01094 437 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 IL10RAQ13651 578 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 STEAP3Q658P3 488 aa12.8□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TCEAL6Q6IPX3 200 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms