RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 RAD23AP54725 363 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.11
RAB5C-201ENST00000346213 TMEM176BQ3YBM2 270 aaPredicted RBP14.33□□□□□ -0.11
RAB5C-201ENST00000346213 ANKRD34AQ69YU3 496 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 PLEKHM3Q6ZWE6 761 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 BBS10Q8TAM1 723 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 OSTF1Q92882 214 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 FAM210AQ96ND0 272 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 MBOAT4Q96T53 435 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF559Q9BR84 538 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 TOR3AQ9H497 397 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 POLE3Q9NRF9 147 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 MYRFQ9Y2G1 1151 aa14.33□□□□□ -0.11
RAB5C-201ENST00000346213 GPC6Q9Y625 555 aaPredicted RBP14.33□□□□□ -0.11
RAB5C-201ENST00000346213 CCDC168Q8NDH2 2452 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF469Q96JG9 3925 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF814B7Z6K7 855 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 SS18L1O75177 396 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-201ENST00000346213 SERPINB7O75635 380 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 PRG2P13727 222 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 TNFRSF1BP20333 461 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 RRM2P31350 389 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 KCNJ5P48544 419 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 CRISP3P54108 245 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 DUSP7Q16829 419 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 KDM4DQ6B0I6 523 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF836Q6ZNA1 936 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ESPNLQ6ZVH7 1005 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 SMYD1Q8NB12 490 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 RNF128Q8TEB7 428 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 MRGPRX4Q96LA9 322 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 MRPS26Q9BYN8 205 aaKnown RBP14.33□□□□□ -0.12
RAB5C-201ENST00000346213 AMBRA1Q9C0C7 1298 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 CTPS2Q9NRF8 586 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 FAM118AQ9NWS6 357 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 PDP1Q9P0J1 537 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ORC6Q9Y5N6 252 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 ENPP4Q9Y6X5 453 aa14.33□□□□□ -0.12
RAB5C-201ENST00000346213 A0A0G2JPF8 293 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 HNRNPCL2B2RXH8 293 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 HNRNPCL3B7ZW38 293 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 SMAD9O15198 467 aaKnown RBP14.32□□□□□ -0.12
RAB5C-201ENST00000346213 RAMP1O60894 148 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 HNRNPCL4P0DMR1 293 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 ETS2P15036 469 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 ADH6P28332 368 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 OR1E2P47887 323 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 DAPP51397 102 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 CBFBQ13951 182 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 SGCBQ16585 318 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 MRPL2Q5T653 305 aaKnown RBP14.32□□□□□ -0.12
RAB5C-201ENST00000346213 FAM214BQ7L5A3 538 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 NUFIP2Q7Z417 695 aaKnown RBP14.32□□□□□ -0.12
RAB5C-201ENST00000346213 CYP4Z1Q86W10 505 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 KRT73Q86Y46 540 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 CLIP4Q8N3C7 705 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF555Q8NEP9 628 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 TOR1AIP2Q8NFQ8 470 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 GPR32P1Q8NGA4 272 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 ARL5BQ96KC2 179 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 YTHDF1Q9BYJ9 559 aaKnown RBP14.32□□□□□ -0.12
RAB5C-201ENST00000346213 OR11A1Q9GZK7 315 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 ACER3Q9NUN7 267 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 LIPT1Q9Y234 373 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 SH3GLB1Q9Y371 365 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 LYVE1Q9Y5Y7 322 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 CREBBPQ92793 2442 aa14.32□□□□□ -0.12
RAB5C-201ENST00000346213 SPG11Q96JI7 2443 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 A6NNC1 897 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 TNFRSF11BO00300 401 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 SLC16A6O15403 523 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 SOX30O94993 753 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 CLIC3O95833 236 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 AGR2O95994 175 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 IFNW1P05000 195 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 FESP07332 822 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 GKN3PP0CG01 181 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 RHCEP18577 417 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 IGFBP5P24593 272 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 AGTR1P30556 359 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 EEF1A1P68104 462 aaKnown RBP14.31□□□□□ -0.12
RAB5C-201ENST00000346213 APOFQ13790 326 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 FAHD1Q6P587 224 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF550Q7Z398 422 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 TMEM200AQ86VY9 491 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 OR4C15Q8NGM1 316 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 WFDC6Q9BQY6 131 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 RASSF1Q9NS23 344 aa14.31□□□□□ -0.12
RAB5C-201ENST00000346213 ZC3H12DA2A288 527 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 MSTNO14793 375 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 FRS3O43559 492 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CRHP06850 196 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 NTF4P34130 210 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 EIF1P41567 113 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 ACAA2P42765 397 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 HMGA2P52926 109 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 RPS3AP61247 264 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms