RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MBTPS2O43462 519 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 UTS2O95399 124 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 UBL4AP11441 157 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 SNRPBP14678 240 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 RBMS1P29558 406 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 MAGEB1P43366 347 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 PPICP45877 212 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ACTA2P62736 377 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ACTG2P63267 376 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 CFHR1Q03591 330 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 GRM7Q14831 915 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 CCDC85BQ15834 202 aaPredicted RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 LEG1Q6P5S2 330 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF511Q8NB15 262 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 OR7G1Q8NGA0 311 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 SLC19A3Q9BZV2 496 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 NRSN2Q9GZP1 204 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 SYNDIG1Q9H7V2 258 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 RPRD1BQ9NQG5 326 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 CUTCQ9NTM9 273 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 FER1L5A0AVI2 2057 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 TRAV1-2A0A0B4J238 106 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 A0A1B0GVT2 93 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 CDC14CA4D256 554 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 GMFGO60234 142 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 WISP1O95388 367 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 IGKV3-11P04433 115 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 F13BP05160 661 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 UCHL1P09936 223 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 EPXP11678 715 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 CAPZA2P47755 286 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 INPP1P49441 399 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 SRP9P49458 86 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 NANOS3P60323 173 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 PRPS1P60891 318 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 RACK1P63244 317 aaKnown RBP14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ISXQ2M1V0 245 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 TMEM151BQ8IW70 566 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF440Q8IYI8 595 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 WDFY3Q8IZQ1 3526 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ADIPOR1Q96A54 375 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ADOQ96SZ5 270 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 MMP25Q9NPA2 562 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 HIF3AQ9Y2N7 669 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 NPFFR2Q9Y5X5 522 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 RNF215Q9Y6U7 377 aa14.08□□□□□ -0.16
UPF3B-202ENST00000345865 IGKV3D-11A0A0A0MRZ8 115 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 A6NL46 340 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 LMO7DNF2Z398 122 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 DCTN6O00399 190 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 PIN1P1O15428 100 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 EEF1E1O43324 174 aaKnown RBP14.07□□□□□ -0.16
UPF3B-202ENST00000345865 DDAH2O95865 285 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 HPGDP15428 266 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 EDNRAP25101 427 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 SLC6A1P30531 599 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 BTCP35070 178 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 TALDO1P37837 337 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 RAB25P57735 213 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 OR1D5P58170 312 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 LGALS3BPQ08380 585 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 RPL22L1Q6P5R6 122 aaKnown RBP14.07□□□□□ -0.16
UPF3B-202ENST00000345865 OGFOD3Q6PK18 319 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ESPNLQ6ZVH7 1005 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 TDHQ8IZJ6 230 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 EXD3Q8N9H8 876 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF721Q8TF20 911 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 RFT1Q96AA3 541 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 KTI12Q96EK9 354 aaPredicted RBP14.07□□□□□ -0.16
UPF3B-202ENST00000345865 NANSQ9NR45 359 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ITGB1BP2Q9UKP3 347 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 AK6Q9Y3D8 172 aaKnown RBP14.07□□□□□ -0.16
UPF3B-202ENST00000345865 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 TMEM150CB9EJG8 249 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 SCDO00767 359 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF264O43296 627 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 OR2B3O76000 313 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 GLCEO94923 617 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ASAH2BP0C7U1 165 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 GRK6P43250 576 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 C14orf28Q4W4Y0 310 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 SLC35D3Q5M8T2 416 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF684Q5T5D7 378 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 C10orf53Q8N6V4 93 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 LIPHQ8WWY8 451 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 DNAJA3Q96EY1 480 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 LPAR4Q99677 370 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 PELOQ9BRX2 385 aaKnown RBP14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ALG12Q9BV10 488 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 CHRNA10Q9GZZ6 450 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 CHRDQ9H2X0 955 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 ANKRD10Q9NXR5 420 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 EPHA6Q9UF33 1036 aa14.07□□□□□ -0.16
UPF3B-202ENST00000345865 NOTOA8MTQ0 251 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ICOSLGO75144 302 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 PNMTP11086 282 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 AHCYP23526 432 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 CTXN1P60606 82 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms