RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 AKR7LQ8NHP1 331 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 SSX3Q99909 188 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 PLXNB3Q9ULL4 1909 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 PRAMEF27A3QJZ7 478 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF705EA8MWA4 302 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 F8VVB4 439 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 F8VWA3 439 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 SAP18O00422 153 aaKnown RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 NPC1O15118 1278 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 OIP5O43482 229 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 TRHRP34981 398 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 CSNK1DP48730 415 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 PCBP4P57723 403 aaKnown RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 PIP5KL1Q5T9C9 394 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 OR10K2Q6IF99 312 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 RPTNQ6XPR3 784 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 SLC29A4Q7RTT9 530 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 DUSP19Q8WTR2 217 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 TRIM43Q96BQ3 446 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 LURAP1Q96LR2 239 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 RIOK2Q9BVS4 552 aaKnown RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 TSPAN10Q9H1Z9 355 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 GFOD1Q9NXC2 390 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 LHX6Q9UPM6 363 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 MOKQ9UQ07 419 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 V9GY05 133 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 A0A1W2PPK0 400 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 LY86O95711 162 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 FGBP02675 491 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SLC2A1P11166 492 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 IMPA1P29218 277 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 GLP1RP43220 463 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 GPR4P46093 362 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 RNF4P78317 190 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SRSF3P84103 164 aaKnown RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 PNLIPRP3Q17RR3 467 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SERPINA13PQ6UXR4 307 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 ARRDC1Q8N5I2 433 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 LINC01599Q8WXQ3 324 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SAT2Q96F10 170 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SPSB2Q99619 263 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 ZCCHC2Q9C0B9 1178 aaKnown RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 TRPC4Q9UBN4 977 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 B4GALT2O60909 372 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 FARS2O95363 451 aaKnown RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 HSPB3Q12988 150 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 ALKBH1Q13686 389 aaKnown RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 AUTS2Q8WXX7 1259 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 SLC25A21Q9BQT8 299 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-201ENST00000342245 ADAM19Q9H013 955 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 ADGRL4Q9HBW9 690 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 IL20RAQ9UHF4 553 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 POMT1Q9Y6A1 747 aa17.05■□□□□ 0.32
SMPD1-201ENST00000342245 CCL15-CCL14A0A0B4J2E2 113 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 SULT2B1O00204 365 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 CD74P04233 296 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 ITGB2P05107 769 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR4E1P0C645 316 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 GRK4P32298 578 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 CAV2P51636 162 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 RGS8P57771 180 aaPredicted RBP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 ELAVL2Q12926 359 aaKnown RBP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 TAF13Q15543 124 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 CCL15Q16663 113 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 ANKRD39Q53RE8 183 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 NRMQ8IXM6 262 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR10H5Q8NGA6 315 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR5AP2Q8NGF4 316 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR6K2Q8NGY2 324 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 PIK3IP1Q96FE7 263 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 NEU1Q99519 415 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 MRPS30Q9NP92 439 aaKnown RBP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 FCF1Q9Y324 198 aaKnown RBP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF337Q9Y3M9 751 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 EMC8O43402 210 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 RD3LP0DJH9 198 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 NQO2P16083 231 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 RPS11P62280 158 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 RPE65Q16518 533 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF239Q16600 458 aaKnown RBP17.04■□□□□ 0.32
SMPD1-201ENST00000342245 IER5LQ5T953 404 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR52W1Q6IF63 320 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 TAS1R1Q7RTX1 841 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR14A2Q96R54 314 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 CLCC1Q96S66 551 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 MESP1Q9BRJ9 268 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 KLHL28Q9NXS3 571 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 OR5V1Q9UGF6 321 aa17.04■□□□□ 0.32
SMPD1-201ENST00000342245 CPSF4LA6NMK7 179 aaKnown RBP17.03■□□□□ 0.32
SMPD1-201ENST00000342245 M0QZ92 97 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 MFNGO00587 321 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 XRCC3O43542 346 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 VNN2O95498 520 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 NDUFB7P17568 137 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 BMP7P18075 431 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 POU3F4P49335 361 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 SIRPAP78324 504 aa17.03■□□□□ 0.32
SMPD1-201ENST00000342245 AIMP2Q13155 320 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms