RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RHNO1Q9BSD3 238 aa15.67■□□□□ 0.1
CLDN4-201ENST00000340958 TMEM185BQ9H7F4 350 aa15.67■□□□□ 0.1
CLDN4-201ENST00000340958 PAK1IP1Q9NWT1 392 aaPredicted RBP15.67■□□□□ 0.1
CLDN4-201ENST00000340958 PSORS1C1Q9UIG5 152 aa15.67■□□□□ 0.1
CLDN4-201ENST00000340958 BOKQ9UMX3 212 aaPredicted RBP15.67■□□□□ 0.1
CLDN4-201ENST00000340958 IER3IP1Q9Y5U9 82 aa15.67■□□□□ 0.1
CLDN4-201ENST00000340958 A0A0G2JMM0 328 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 A0A1W2PPB8 328 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 A0A1W2PRS3 328 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 EFCAB10A6NFE3 127 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 KIR3DP1A8MWS1 328 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 MCIDASD6RGH6 385 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 TRIM3O75382 744 aaPredicted RBP15.66■□□□□ 0.1
CLDN4-201ENST00000340958 TRAPPC6AO75865 159 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SLC2A10O95528 541 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 BGLAPP02818 100 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ASAH2BP0C7U1 165 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ZNF3P17036 446 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 WT1P19544 449 aaPredicted RBP15.66■□□□□ 0.1
CLDN4-201ENST00000340958 AHCYP23526 432 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ADH6P28332 368 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SLC35A2P78381 396 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 PMS2P3Q13401 168 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 OR7A5Q15622 319 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ANKDD1AQ495B1 522 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SYT14P1Q58G82 188 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ANKK1Q8NFD2 765 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 MOSPD2Q8NHP6 518 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 GGHQ92820 318 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ZNF582Q96NG8 517 aaPredicted RBP15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SIGLEC12Q96PQ1 595 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 KLHL1Q9NR64 748 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 HIF3AQ9Y2N7 669 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ETV2O00321 342 aaPredicted RBP15.66■□□□□ 0.1
CLDN4-201ENST00000340958 NPIPB7O75200 414 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 NEURL1O76050 574 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 OPN1LWP04000 364 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 TFAP2AP05549 437 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ADORA3P0DMS8 318 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 IL11P20809 199 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 PAICSP22234 425 aaKnown RBP15.66■□□□□ 0.1
CLDN4-201ENST00000340958 IDUAP35475 653 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 DLX5P56178 289 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ERVK-25P63136 954 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SELENBP1Q13228 472 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 MFSD13AQ14CX5 517 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 TMEM201Q5SNT2 666 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 SLC25A30Q5SVS4 291 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 CCDC81Q6ZN84 652 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 ZNF227Q86WZ6 799 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 OR5J2Q8NH18 312 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 OR14L1PQ8NHC6 308 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 RFKQ969G6 155 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 C5orf34Q96MH7 638 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 FAM173AQ9BQD7 235 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 PTDSS2Q9BVG9 487 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 DUSP21Q9H596 190 aa15.66■□□□□ 0.1
CLDN4-201ENST00000340958 OR5H15A6NDH6 313 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 PRR23D1E9PI22 279 aaPredicted RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 C11orf98E9PRG8 122 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 M0R3G1 203 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 RNF13O43567 381 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 F13BP05160 661 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 PRR23D2P0DMB1 279 aaPredicted RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 FKBP2P26885 142 aaKnown RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 ACVR2AP27037 513 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 GRPRP30550 384 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 SLC16A1P53985 500 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 CTXN1P60606 82 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 RPS4XP62701 263 aaKnown RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 FOXK1P85037 733 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 RPL18Q07020 188 aaKnown RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 FHL1Q13642 323 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 TMEM44Q2T9K0 475 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 PLBD1Q6P4A8 553 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 CXXC5Q7LFL8 322 aaKnown RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 SATL1Q86VE3 508 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 CPOQ8IVL8 374 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 SPARTQ8N0X7 666 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 GTPBP8Q8N3Z3 284 aaPredicted RBP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 SVOPQ8N4V2 548 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 OR52E2Q8NGJ4 325 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 ARL5BQ96KC2 179 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 OR5B2Q96R09 309 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 PIGQQ9BRB3 760 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 KATNB1Q9BVA0 655 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 ZFP64Q9NPA5 681 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 CMC2Q9NRP2 79 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 B4GALT7Q9UBV7 327 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLDN4-201ENST00000340958 ADAM18Q9Y3Q7 739 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 PCNX3Q9H6A9 2034 aa15.65■□□□□ 0.1
CLDN4-201ENST00000340958 FAM183AA6NL82 134 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 PRODHO43272 600 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 CD46P15529 392 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 GDF1P27539 372 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SFTPDP35247 375 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 CDH11P55287 796 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SOX8P57073 446 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms