RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MYOTQ9UBF9 498 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 USP22Q9UPT9 525 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 DBHP09172 617 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 RAC2P15153 192 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 IL12AP29459 219 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 LCN1P31025 176 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 ADH7P40394 386 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 CBLL1Q75N03 491 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 KDM8Q8N371 416 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
LIN54-201ENST00000340417 SLC5A7Q9GZV3 580 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 ATG5Q9H1Y0 275 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 FAM118AQ9NWS6 357 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 SH2B3Q9UQQ2 575 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 KCNE1BA0A087WTH5 132 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 STARP49675 285 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 PRR18Q8N4B5 295 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 TRPM6Q9BX84 2022 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 FCER2P06734 321 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 SLC2A5P22732 501 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 GABRR1P24046 479 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 MVKQ03426 396 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 PRSS41Q7RTY9 318 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 CAMKMTQ7Z624 323 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 ST7LQ8TDW4 575 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 TNFRSF13CQ96RJ3 184 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 A0A0A6YYD5 115 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 DPPA5A6NC42 116 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 J3KTA2 159 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 SYT5O00445 386 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 SCGB2A1O75556 95 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 EDN3P14138 238 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 DRD5P21918 477 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 B3GNT8Q7Z7M8 397 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 GALNT9Q9HCQ5 603 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ASB1Q9Y576 335 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 TMEM269A0A1B0GVZ9 245 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 COX6B1P14854 86 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ZNF44P15621 663 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 CSRP1P21291 193 aaKnown RBP11.75□□□□□ -0.53
LIN54-201ENST00000340417 ABCD3P28288 659 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ATP1B3P54709 279 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 GOLM1Q8NBJ4 401 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ABHD4Q8TB40 342 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 SAP130Q9H0E3 1048 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 MRPS18BQ9Y676 258 aaKnown RBP11.75□□□□□ -0.53
LIN54-201ENST00000340417 M0R082 166 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 OR7A10O76100 309 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 RAB3AP20336 220 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 LGALS4P56470 323 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 TP53I3Q53FA7 332 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 GCNT2Q8N0V5 402 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ZNF417Q8TAU3 575 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 TNFAIP8L1Q8WVP5 186 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 GNRHR2Q96P88 292 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ZNF587Q96SQ5 575 aaPredicted RBP11.75□□□□□ -0.53
LIN54-201ENST00000340417 ZNF639Q9UID6 485 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 TMIGD3P0DMS9 266 aaPredicted RBP11.75□□□□□ -0.53
LIN54-201ENST00000340417 TGIF1Q15583 401 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 ANKRD34AQ69YU3 496 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 OR52N5Q8NH56 324 aa11.75□□□□□ -0.53
LIN54-201ENST00000340417 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 CHP2O43745 196 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 DOK2O60496 412 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 IFNGR1P15260 489 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 PRKCDQ05655 676 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ZNF684Q5T5D7 378 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 SAXO2Q658L1 398 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 A0A096LPE4 126 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PPH5 198 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 FABP12A6NFH5 140 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 UPK1AO00322 258 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 GREM1O60565 184 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 CDRT1O95170 752 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 LIFP15018 202 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 AZGP1P25311 298 aaKnown RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 TMEM244Q5VVB8 128 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ZNF782Q6ZMW2 699 aaPredicted RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 AKAP1Q92667 903 aaKnown RBP eCLIP11.74□□□□□ -0.53
LIN54-201ENST00000340417 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 FAM240BA0A1B0GVZ2 78 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 NOS1APO75052 506 aaPredicted RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 NID1P14543 1247 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ARR3P36575 388 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 MAGEA12P43365 314 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 SUMO3P55854 103 aaPredicted RBP11.74□□□□□ -0.53
LIN54-201ENST00000340417 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 OR11A1Q9GZK7 315 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 PRDM7Q9NQW5 492 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ASIC5Q9NY37 505 aa11.74□□□□□ -0.53
LIN54-201ENST00000340417 ZNF850A8MQ14 1090 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms