RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LTBQ06643 244 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 FOXD4Q12950 439 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 IFI44LQ53G44 452 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 TTC33Q6PID6 262 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF100Q8IYN0 542 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 MPP4Q96JB8 637 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 MOGAT1Q96PD6 335 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF426Q9BUY5 554 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 SF3B5Q9BWJ5 86 aaKnown RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 POLR2J2Q9GZM3 115 aaKnown RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 GORASP2Q9H8Y8 452 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 C6orf203Q9P0P8 240 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 RPS6KA6Q9UK32 745 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 A4GNTQ9UNA3 340 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 HRNRQ86YZ3 2850 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-201ENST00000340074 LRRN3E7EW58 273 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 C16orf97H3BN30 126 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 J3KTA2 159 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 M0R082 166 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 KPNA4O00629 521 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-201ENST00000340074 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
UBE3B-201ENST00000340074 UBOX5O94941 541 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 BGLAPP02818 100 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 CCKARP32238 428 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 YAP1P46937 504 aaKnown RBP13.51□□□□□ -0.25
UBE3B-201ENST00000340074 SPATS1Q496A3 300 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 NKAIN4Q8IVV8 208 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 GABRG1Q8N1C3 465 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 KDM8Q8N371 416 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 C10orf53Q8N6V4 93 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 OR6S1Q8NH40 331 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF417Q8TAU3 575 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 C14orf79Q96F83 325 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF587Q96SQ5 575 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-201ENST00000340074 SAMD4AQ9UPU9 718 aaKnown RBP13.51□□□□□ -0.25
UBE3B-201ENST00000340074 RASD1Q9Y272 281 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 CSMD2Q7Z408 3487 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 LRBAP50851 2863 aa13.51□□□□□ -0.25
UBE3B-201ENST00000340074 ABCA12Q86UK0 2595 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 SH3D21A4FU49 640 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 ARPC2O15144 300 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 VAMP5O95183 116 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 FUT4P22083 530 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 MFSD13AQ14CX5 517 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 STAC2Q6ZMT1 411 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 CXorf67Q86X51 503 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-201ENST00000340074 FAM86B1Q8N7N1 296 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 ZIC4Q8N9L1 334 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 FAM222BQ8WU58 562 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 TMEM255BQ8WV15 326 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 APH1AQ96BI3 265 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
UBE3B-201ENST00000340074 C1orf21Q9H246 121 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 FANCFQ9NPI8 374 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 MEPEQ9NQ76 525 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-201ENST00000340074 TAS2R1Q9NYW7 299 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 NDRG3Q9UGV2 375 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 B3GALT5Q9Y2C3 310 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 V9GYQ6 96 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 ALPK2Q86TB3 2170 aa13.5□□□□□ -0.25
UBE3B-201ENST00000340074 ADAP00813 363 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 IGHV3-9P01782 118 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 THRBP10828 461 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 EPXP11678 715 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 NQO1P15559 274 aaKnown RBP13.49□□□□□ -0.25
UBE3B-201ENST00000340074 SSTR2P30874 369 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 UGT2B15P54855 530 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 TLE4Q04727 773 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 ST3GAL3Q11203 375 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 TSC22D1Q15714 1073 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 CASP12Q6UXS9 341 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 Q6ZT83 130 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 CREB3L2Q70SY1 520 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 H1FNTQ75WM6 255 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-201ENST00000340074 ARHGAP24Q8N264 748 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 SCAIQ8N9R8 606 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 TMEM45BQ96B21 275 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 NSMCE2Q96MF7 247 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 SLC19A3Q9BZV2 496 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 MRPL39Q9NYK5 338 aaKnown RBP13.49□□□□□ -0.25
UBE3B-201ENST00000340074 B3GAT1Q9P2W7 334 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 TESMINQ9Y4I5 508 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 CORINQ9Y5Q5 1042 aa13.49□□□□□ -0.25
UBE3B-201ENST00000340074 MS4A18H0YCH9 400 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 FFAR1O14842 300 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PDE5AO76074 875 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 CH25HO95992 272 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 MT-ATP6P00846 226 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 IFNA8P32881 189 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 RBM34P42696 430 aaKnown RBP13.48□□□□□ -0.25
UBE3B-201ENST00000340074 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms