RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ASAH1Q13510 395 aa11□□□□□ -0.65
USP1-201ENST00000339950 SF3A2Q15428 464 aaKnown RBP11□□□□□ -0.65
USP1-201ENST00000339950 SHHQ15465 462 aa11□□□□□ -0.65
USP1-201ENST00000339950 KIRREL2Q6UWL6 708 aa11□□□□□ -0.65
USP1-201ENST00000339950 PTP4A1Q93096 173 aa11□□□□□ -0.65
USP1-201ENST00000339950 VWCEQ96DN2 955 aa11□□□□□ -0.65
USP1-201ENST00000339950 GON7Q9BXV9 100 aa11□□□□□ -0.65
USP1-201ENST00000339950 ATG5Q9H1Y0 275 aa11□□□□□ -0.65
USP1-201ENST00000339950 KDM4EB2RXH2 506 aaPredicted RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 NDUFB2O95178 105 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 SEMA4FO95754 770 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ATF1P18846 271 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 TPBGQ13641 420 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 MELKQ14680 651 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ZCCHC12Q6PEW1 402 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 PLCL2Q9UPR0 1127 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 C13orf42A0A1B0GVH6 325 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 RHPN2P1A8MT19 583 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 C17orf105B2RV13 164 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 GALK2Q01415 458 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 MCATQ8IVS2 390 aaKnown RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 PLPP7Q8NBV4 271 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 OR51D1Q8NGF3 324 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 OR52I2Q8NH67 350 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 GPR119Q8TDV5 335 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 SPACA5Q96QH8 159 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 TMEM43Q9BTV4 400 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 NXF2Q9GZY0 626 aaKnown RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 NARFLQ9H6Q4 476 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 EXO5Q9H790 373 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 RXFP3Q9NSD7 469 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 MSRAQ9UJ68 235 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 KCND3Q9UK17 655 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 DTX4Q9Y2E6 619 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 TRIM3O75382 744 aaPredicted RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 ADRB1P08588 477 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 HNRNPA2B1P22626 353 aaKnown RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 NDUFS1P28331 727 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 TAF13Q15543 124 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 BCL2A1Q16548 175 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 MEP1BQ16820 701 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 TMEM91Q6ZNR0 172 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 KRT77Q7Z794 578 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 CD163Q86VB7 1156 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 RCBTB1Q8NDN9 531 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 S100A16Q96FQ6 103 aaKnown RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 SEC22AQ96IW7 307 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 SERINC2Q96SA4 455 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ARPC5LQ9BPX5 153 aa10.99□□□□□ -0.65
USP1-201ENST00000339950 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
USP1-201ENST00000339950 TMEM129A0AVI4 362 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 TFP02787 698 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 GFERP55789 205 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 KIAA1024LP59773 190 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SPOCK1Q08629 439 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SIGLEC14Q08ET2 396 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 EIF2B5Q13144 721 aaKnown RBP10.98□□□□□ -0.65
USP1-201ENST00000339950 FAM53BQ14153 422 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 NSDHLQ15738 373 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 PCGF3Q3KNV8 242 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 LINC00346Q8IVM7 164 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 IL17RCQ8NAC3 791 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 HCAR2Q8TDS4 363 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 VOPP1Q96AW1 172 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SLC39A1Q9NY26 324 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 KLHL9Q9P2J3 617 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 CA14Q9ULX7 337 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 DOCK7Q96N67 2140 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 A0A0B4J293 547 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 B8ZZF3 427 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 DCTDP32321 178 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 DNASE1L1P49184 302 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 PSMD4P55036 377 aaKnown RBP10.98□□□□□ -0.65
USP1-201ENST00000339950 ALG11Q2TAA5 492 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 CBLN3Q6UW01 205 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
USP1-201ENST00000339950 KLHDC7BQ96G42 594 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 PIGUQ9H490 435 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 LSM2Q9Y333 95 aaKnown RBP10.98□□□□□ -0.65
USP1-201ENST00000339950 NID1P14543 1247 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 LSSP48449 732 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 TPMTP51580 245 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SIRPAP78324 504 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 DECR1Q16698 335 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 VWA2Q5GFL6 755 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 C1QL3Q5VWW1 255 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 SAMD14Q8IZD0 417 aaPredicted RBP10.98□□□□□ -0.65
USP1-201ENST00000339950 OR11A1Q9GZK7 315 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 LIN7BQ9HAP6 207 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 EDARQ9UNE0 448 aa10.98□□□□□ -0.65
USP1-201ENST00000339950 TRABD2BA6NFA1 517 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 SLC19A2O60779 497 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 THY1P04216 161 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms