RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PDLIM1O00151 329 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 SNX3O60493 162 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 FMO6PO60774 539 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 MRPL33O75394 65 aaKnown RBP13.46□□□□□ -0.25
PRKN-201ENST00000338468 PNMTP11086 282 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 IL32P24001 234 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 DNASE1P24855 282 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 CDH12P55289 794 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 VEZF1Q14119 521 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 INTS11Q5TA45 600 aaKnown RBP13.46□□□□□ -0.25
PRKN-201ENST00000338468 C8orf82Q6P1X6 216 aaPredicted RBP13.46□□□□□ -0.25
PRKN-201ENST00000338468 BHLHA15Q7RTS1 189 aaPredicted RBP13.46□□□□□ -0.25
PRKN-201ENST00000338468 ZNF433Q8N7K0 673 aaPredicted RBP13.46□□□□□ -0.25
PRKN-201ENST00000338468 TMEM45BQ96B21 275 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 SLC25A36Q96CQ1 311 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 SLC47A1Q96FL8 570 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 ALPK1Q96QP1 1244 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 MCHR1Q99705 422 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 TAPBPLQ9BX59 468 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 MALT1Q9UDY8 824 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.25
PRKN-201ENST00000338468 RAI1Q7Z5J4 1906 aaPredicted RBP13.45□□□□□ -0.26
PRKN-201ENST00000338468 FAM220BPB1ANY3 271 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 ITGA5P08648 1049 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 PTNP21246 168 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 NCALDP61601 193 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 LTBQ06643 244 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 BEX5Q5H9J7 111 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 LINC00114Q6XXX2 140 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 WDR88Q6ZMY6 472 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 RANBP3LQ86VV4 465 aaPredicted RBP13.45□□□□□ -0.26
PRKN-201ENST00000338468 EPHX4Q8IUS5 362 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 KDM8Q8N371 416 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 VANGL1Q8TAA9 524 aaPredicted RBP13.45□□□□□ -0.26
PRKN-201ENST00000338468 TMEM204Q9BSN7 226 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 PCDHAC1Q9H158 963 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 SLC7A10Q9NS82 523 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 B3GAT1Q9P2W7 334 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 ROS1P08922 2347 aa13.45□□□□□ -0.26
PRKN-201ENST00000338468 TRAV36DV7A0A075B6V5 113 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 GMNCA6NCL1 334 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 AIM2O14862 343 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 PLAUP00749 431 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 BGLAPP02818 100 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 RAF1P04049 648 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 CD53P19397 219 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 TNFRSF1BP20333 461 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 FAPQ12884 760 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 ENTPD8Q5MY95 495 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
PRKN-201ENST00000338468 FAM69AQ5T7M9 428 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 TMEM225Q6GV28 225 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 ERICH5Q6P6B1 374 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 C5orf46Q6UWT4 87 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 CREB3L2Q70SY1 520 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 GPAT4Q86UL3 456 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 UBE2J2Q8N2K1 259 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 HSD17B8Q92506 261 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 PLPPR2Q96GM1 343 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 RASD1Q9Y272 281 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 VPS13CQ709C8 3753 aa13.44□□□□□ -0.26
PRKN-201ENST00000338468 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
PRKN-201ENST00000338468 LRRN3E7EW58 273 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 M0R082 166 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 VAMP5O95183 116 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 GRPRP30550 384 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 GNGT1P63211 74 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 LGALS3BPQ08380 585 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 ALKBH2Q6NS38 261 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 BIVMQ86UB2 503 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 MICU2Q8IYU8 434 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 OR2T12Q8NG77 320 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 OR6S1Q8NH40 331 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 ZNF417Q8TAU3 575 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 SLC26A7Q8TE54 656 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 ADAMTS16Q8TE57 1224 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 SLC41A3Q96GZ6 507 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
PRKN-201ENST00000338468 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
PRKN-201ENST00000338468 TMEM43Q9BTV4 400 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 PARPBPQ9NWS1 579 aa13.43□□□□□ -0.26
PRKN-201ENST00000338468 NSD1Q96L73 2696 aaPredicted RBP13.43□□□□□ -0.26
PRKN-201ENST00000338468 OR5H1A6NKK0 313 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 NME4O00746 187 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 CHP2O43745 196 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 OR2T1O43869 369 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 RAD51DO75771 328 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 HPRP00739 348 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 GGT1P19440 569 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 CBLP22681 906 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms