RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 HLA-DOBP13765 273 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 EIF1AXP47813 144 aaKnown RBP14.8□□□□□ -0.04
SHOX-201ENST00000334060 IL1RL1Q01638 556 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 PRKCDQ05655 676 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 PPP4R4Q6NUP7 873 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 TMEM99Q8N816 258 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 OR8D4Q8NGM9 314 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 ZNF775Q96BV0 537 aaPredicted RBP14.8□□□□□ -0.04
SHOX-201ENST00000334060 POLR2J2Q9GZM3 115 aaKnown RBP14.8□□□□□ -0.04
SHOX-201ENST00000334060 POLR2J3Q9H1A7 115 aaKnown RBP14.8□□□□□ -0.04
SHOX-201ENST00000334060 QPCTLQ9NXS2 382 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 KLHL13Q9P2N7 655 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 SH3BGRL2Q9UJC5 107 aa14.8□□□□□ -0.04
SHOX-201ENST00000334060 LIPT2A6NK58 231 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 M0R082 166 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 ZNF701M0R085 212 aaPredicted RBP14.79□□□□□ -0.04
SHOX-201ENST00000334060 TFAP2AP05549 437 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 SMIM18P0DKX4 95 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 THRBP10828 461 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 ELK4P28324 431 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 GRPRP30550 384 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 HTR3AP46098 478 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 GSSP48637 474 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 PPP2R2BQ00005 443 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 ZIK1Q3SY52 487 aaPredicted RBP14.79□□□□□ -0.04
SHOX-201ENST00000334060 ZNF417Q8TAU3 575 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 MAGEE2Q8TD90 523 aaPredicted RBP14.79□□□□□ -0.04
SHOX-201ENST00000334060 TNFRSF13CQ96RJ3 184 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 ZNF587Q96SQ5 575 aaPredicted RBP14.79□□□□□ -0.04
SHOX-201ENST00000334060 TUBA1CQ9BQE3 449 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 TMEM43Q9BTV4 400 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 EVA1AQ9H8M9 152 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 TMCC3Q9ULS5 477 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 CAMK2AQ9UQM7 478 aa14.79□□□□□ -0.04
SHOX-201ENST00000334060 GTF3C1Q12789 2109 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 A0A1B0GVC2 190 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 M0R129 80 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 ATXN7O15265 892 aaPredicted RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 ZNF208O43345 1280 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 SERPINI2O75830 405 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 AQP8O94778 261 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 CHMP24386 653 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 P2RY4P51582 365 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 C1orf94Q6P1W5 598 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 FAHD1Q6P587 224 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 ZDHHC13Q8IUH4 622 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 OSTF1Q92882 214 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 EME1Q96AY2 570 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 ANKRD19PQ9H560 264 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 C12orf10Q9HB07 376 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 MCCC2Q9HCC0 563 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 REV1Q9UBZ9 1251 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 TRAV36DV7A0A075B6V5 113 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 IMPA2O14732 288 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 SMAD9O15198 467 aaKnown RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 TGM6O95932 706 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 SAGP10523 405 aaPredicted RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 EDNRAP25101 427 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 AQP2P41181 271 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 RBM34P42696 430 aaKnown RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 OR2B6P58173 313 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 MRPL49Q13405 166 aaKnown RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 INAQ16352 499 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 NHSL2Q5HYW2 709 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 TMEM236Q5W0B7 351 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 HBMQ6B0K9 141 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 TMPPEQ6ZT21 453 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.78□□□□□ -0.04
SHOX-201ENST00000334060 IQCF1Q8N6M8 205 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 ATG16L2Q8NAA4 619 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 FNDC9Q8TBE3 224 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 CPT1CQ8TCG5 803 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 DDIT4LQ96D03 193 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 SGTBQ96EQ0 304 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 OSBPL10Q9BXB5 764 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 RHBDL2Q9NX52 303 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 TINAGQ9UJW2 476 aa14.78□□□□□ -0.04
SHOX-201ENST00000334060 C11orf98E9PRG8 122 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 SULT2B1O00204 365 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 OR7A10O76100 309 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 PLGP00747 810 aaPredicted RBP14.77□□□□□ -0.04
SHOX-201ENST00000334060 CRYABP02511 175 aaKnown RBP14.77□□□□□ -0.04
SHOX-201ENST00000334060 F13BP05160 661 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 ALPLP05186 524 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 ASAH2BP0C7U1 165 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 IDUAP35475 653 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 CTBP2P56545 445 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 IGFBP7Q16270 282 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 SOWAHCQ53LP3 525 aaPredicted RBP14.77□□□□□ -0.04
SHOX-201ENST00000334060 Q6ZNX1 250 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 OR2V1Q8NHB1 315 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 PIGXQ8TBF5 258 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 MIB2Q96AX9 1013 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 SERINC1Q9NRX5 453 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 TAS2R5Q9NYW4 299 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 CLEC4AQ9UMR7 237 aa14.77□□□□□ -0.04
SHOX-201ENST00000334060 ZNF462Q96JM2 2506 aa14.77□□□□□ -0.05
SHOX-201ENST00000334060 BLOC1S5-TXNDC5H3BN57 136 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 AQP7O14520 342 aa14.76□□□□□ -0.05
SHOX-201ENST00000334060 AHSA1O95433 338 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms