RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TRIOBPQ9H2D6 2365 aa15.87■□□□□ 0.13
DDX28-201ENST00000332395 MPDZO75970 2070 aa15.87■□□□□ 0.13
DDX28-201ENST00000332395 MAGEB4O15481 346 aaPredicted RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 TPD52L2O43399 206 aaKnown RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 PRKCAP17252 672 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 NR0B1P51843 470 aaKnown RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 NRG3P56975 720 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 P2RY14Q15391 338 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 SLC35D3Q5M8T2 416 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 IDNKQ5T6J7 187 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 HLA-DQA1Q5Y7H0 255 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 KMT5CQ86Y97 462 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 SYS1Q8N2H4 156 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 C7orf57Q8NEG2 295 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 GHSRQ92847 366 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 ZNF501Q96CX3 271 aaPredicted RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 NUDT22Q9BRQ3 303 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 VN1R1Q9GZP7 353 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 LAT2Q9GZY6 243 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 PCDHGB7Q9Y5F8 929 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 TEX13CA0A0J9YWL9 993 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 SERPINI2O75830 405 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 DCNP07585 359 aaKnown RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 MYL9P24844 172 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 ZNF117Q03924 483 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 ZNF517Q6ZMY9 492 aaPredicted RBP15.86■□□□□ 0.13
DDX28-201ENST00000332395 PXKQ7Z7A4 578 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 OR6K6Q8NGW6 343 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 PELI1Q96FA3 418 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 Q96M85 177 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 SLC22A4Q9H015 551 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 COPS7AQ9UBW8 275 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 ADAM30Q9UKF2 790 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 MKL2Q9ULH7 1088 aa15.86■□□□□ 0.13
DDX28-201ENST00000332395 SELENOFO60613 162 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 ASAH2BP0C7U1 165 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 TACR3P29371 465 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 LCN1P31025 176 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 IL18Q14116 193 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 SHBQ15464 509 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 CDONQ4KMG0 1287 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 YOD1Q5VVQ6 348 aaPredicted RBP15.85■□□□□ 0.13
DDX28-201ENST00000332395 LEG1Q6P5S2 330 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 RAB43Q86YS6 212 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 Q8N402 240 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 MS4A15Q8N5U1 240 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 OR1N1Q8NGS0 311 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 SNX33Q8WV41 574 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 TMEM246Q9BRR3 403 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 WWTR1Q9GZV5 400 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 ADAMTS20P59510 1910 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 A0A1W2PRG6 482 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 FER1L5A0AVI2 2057 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 HCRTR2O43614 444 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 GMFGO60234 142 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 TSPAN2O60636 221 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 SLC19A2O60779 497 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 CD14P08571 375 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 TRAPPC2P0DI81 140 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 TRAPPC2BP0DI82 140 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 SLC2A2P11168 524 aaPredicted RBP15.85■□□□□ 0.13
DDX28-201ENST00000332395 PTBP1P26599 531 aaKnown RBP eCLIP15.85■□□□□ 0.13
DDX28-201ENST00000332395 SLC6A8P48029 635 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 PLCXD2Q0VAA5 305 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 ACSM3Q53FZ2 586 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 ALG10Q5BKT4 473 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 FAM122BQ7Z309 247 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 LRRC75AQ8NAA5 344 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 OR13C5Q8NGS8 318 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 RNF31Q96EP0 1072 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 ELF4Q99607 663 aaPredicted RBP15.85■□□□□ 0.13
DDX28-201ENST00000332395 C11orf54Q9H0W9 315 aaPredicted RBP15.85■□□□□ 0.13
DDX28-201ENST00000332395 ZNF768Q9H5H4 540 aaKnown RBP15.85■□□□□ 0.13
DDX28-201ENST00000332395 SLA2Q9H6Q3 261 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 CTSFQ9UBX1 484 aa15.85■□□□□ 0.13
DDX28-201ENST00000332395 RP1P56715 2156 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 HMX3A6NHT5 357 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 C4orf47A7E2U8 309 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 TO15178 435 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 OGG1O15527 345 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 CDKN2AP42771 156 aaKnown RBP15.84■□□□□ 0.13
DDX28-201ENST00000332395 ARRB1P49407 418 aaPredicted RBP15.84■□□□□ 0.13
DDX28-201ENST00000332395 GBX2P52951 348 aaPredicted RBP15.84■□□□□ 0.13
DDX28-201ENST00000332395 LTBQ06643 244 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 IL10RAQ13651 578 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 CDK5R1Q15078 307 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 FAM209AQ5JX71 171 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 SLC29A4Q7RTT9 530 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 TPRA1Q86W33 373 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 CCDC74AQ96AQ1 378 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 SMIM19Q96E16 107 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 KTI12Q96EK9 354 aaPredicted RBP15.84■□□□□ 0.13
DDX28-201ENST00000332395 DMRTB1Q96MA1 342 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 ADAM19Q9H013 955 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 C12orf10Q9HB07 376 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 COPS3Q9UNS2 423 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 ARID1BQ8NFD5 2236 aaPredicted RBP15.84■□□□□ 0.13
DDX28-201ENST00000332395 CABIN1Q9Y6J0 2220 aa15.84■□□□□ 0.13
DDX28-201ENST00000332395 C17orf51A8MQB3 221 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms