RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 PLGP00747 810 aaPredicted RBP23.12■■□□□ 1.29
SMDT1-201ENST00000331479 CHRNB4P30926 498 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 SEC23BQ15437 767 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF730Q6ZMV8 503 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 MEX3DQ86XN8 651 aaKnown RBP23.12■■□□□ 1.29
SMDT1-201ENST00000331479 MCEMP1Q8IX19 187 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 TUSC5Q8IXB3 177 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 NRMQ8IXM6 262 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 CNEP1R1Q8N9A8 125 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 SSC4DQ8WTU2 575 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF775Q96BV0 537 aaPredicted RBP23.12■■□□□ 1.29
SMDT1-201ENST00000331479 RSRC1Q96IZ7 334 aaKnown RBP23.12■■□□□ 1.29
SMDT1-201ENST00000331479 KLHL4Q9C0H6 718 aa23.12■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF716A6NP11 495 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 SS18L1O75177 396 aaPredicted RBP23.11■■□□□ 1.29
SMDT1-201ENST00000331479 GADD45GO95257 159 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 BMP5P22003 454 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 GTF2E2P29084 291 aaKnown RBP23.11■■□□□ 1.29
SMDT1-201ENST00000331479 SIRPAP78324 504 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 VWA1Q6PCB0 445 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 MBOAT2Q6ZWT7 520 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 SLC46A3Q7Z3Q1 461 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 KDM8Q8N371 416 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 PIGXQ8TBF5 258 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 CCM2LQ9NUG4 571 aaPredicted RBP23.11■■□□□ 1.29
SMDT1-201ENST00000331479 KLHL9Q9P2J3 617 aa23.11■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF629Q9UEG4 869 aaPredicted RBP23.11■■□□□ 1.29
SMDT1-201ENST00000331479 INTS1Q8N201 2190 aaKnown RBP23.11■■□□□ 1.29
SMDT1-201ENST00000331479 MT-ATP6P00846 226 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 CRHP06850 196 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 NQO1P15559 274 aaKnown RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 FAM214BQ7L5A3 538 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF808Q8N4W9 903 aaPredicted RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 PAPD5Q8NDF8 572 aaKnown RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 SFXN3Q9BWM7 321 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 BCO1Q9HAY6 547 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 CHST11Q9NPF2 352 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 GLRX2Q9NS18 164 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 VNN3Q9NY84 501 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 C6orf203Q9P0P8 240 aaPredicted RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 FKBP6O75344 327 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 IGF2P01344 180 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 IFI30P13284 250 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 AGTR1P30556 359 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 SMIM11AP58511 58 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 SLC17A1Q14916 467 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 KPNB1Q14974 876 aaKnown RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 MFSD13AQ14CX5 517 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 XKRXQ6PP77 449 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 H1FNTQ75WM6 255 aaPredicted RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 RNF113BQ8IZP6 322 aaKnown RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 RELL2Q8NC24 303 aaPredicted RBP23.1■■□□□ 1.29
SMDT1-201ENST00000331479 LILRB4Q8NHJ6 448 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 ASB5Q8WWX0 329 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 STARD4Q96DR4 205 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 SGTBQ96EQ0 304 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 UCK2Q9BZX2 261 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 FKRPQ9H9S5 495 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 NANSQ9NR45 359 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 CORINQ9Y5Q5 1042 aa23.1■■□□□ 1.29
SMDT1-201ENST00000331479 IL18BPO95998 194 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 YES1P07947 543 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 FUT1P19526 365 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 MAKP20794 623 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 AGAP20933 346 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 OPRM1P35372 400 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 LIMS1P48059 325 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 CTBP2P56545 445 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 PRKCDQ05655 676 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 PPP1R8Q12972 351 aaKnown RBP23.09■■□□□ 1.29
SMDT1-201ENST00000331479 PDK3Q15120 406 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 TMEM225Q6GV28 225 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 OR2T5Q6IEZ7 315 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 MAMDC2Q7Z304 686 aaPredicted RBP23.09■■□□□ 1.29
SMDT1-201ENST00000331479 BTLAQ7Z6A9 289 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 GPAT4Q86UL3 456 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 OR2T29Q8NH02 315 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 CA5BP1Q8WTZ4 195 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 BPIFA2Q96DR5 249 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 RAB3IPQ96QF0 476 aaPredicted RBP23.09■■□□□ 1.29
SMDT1-201ENST00000331479 ALPK1Q96QP1 1244 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 ASPNQ9BXN1 380 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 GP6Q9HCN6 339 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 MRPL39Q9NYK5 338 aaKnown RBP23.09■■□□□ 1.29
SMDT1-201ENST00000331479 ZNF229Q9UJW7 825 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 B3GALT5Q9Y2C3 310 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 LYVE1Q9Y5Y7 322 aa23.09■■□□□ 1.29
SMDT1-201ENST00000331479 IGKV3D-15A0A087WSY6 115 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 SH3PXD2BA1X283 911 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 OR7A10O76100 309 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 ASAH2BP0C7U1 165 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 HMGA2P52926 109 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 SLC16A1P53985 500 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 ACTR3P61158 418 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 NUFIP2Q7Z417 695 aaKnown RBP23.08■■□□□ 1.29
SMDT1-201ENST00000331479 SCAIQ8N9R8 606 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 OR4K5Q8NGD3 323 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 OR5J2Q8NH18 312 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 B3GAT1Q9P2W7 334 aa23.08■■□□□ 1.29
SMDT1-201ENST00000331479 FAM90A27PA6NNH2 459 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms