RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LAMP1P11279 417 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 MAPK9P45984 424 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 GSK3AP49840 483 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 NRG3P56975 720 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 PJVKQ0ZLH3 352 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 GAGE1Q13065 139 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 RPE65Q16518 533 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF630Q2M218 657 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 GLT8D1Q68CQ7 371 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 LIN54Q6MZP7 749 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 PRSS55Q6UWB4 352 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ZBTB2Q8N680 514 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 OR56B1Q8NGI3 324 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 OR52I2Q8NH67 350 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SPRYD4Q8WW59 207 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 MALSU1Q96EH3 234 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 FGF20Q9NP95 211 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 LANCL2Q9NS86 450 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 MAN2C1Q9NTJ4 1040 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 KLK11Q9UBX7 282 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SLC22A14Q9Y267 594 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 CCDC88CQ9P219 2028 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 FAM183AA6NL82 134 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 HSPA12AO43301 675 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 CLDN11O75508 207 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 PRAMEF12O95522 483 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SERPIND1P05546 499 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ACP2P11117 423 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 BMP7P18075 431 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 RGRP47804 291 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 FAM46CQ5VWP2 391 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 OR2A2Q6IF42 318 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 PSRC1Q6PGN9 363 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 TMPRSS11BQ86T26 416 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 VRK3Q8IV63 474 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 BEND2Q8NDZ0 799 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 TNFAIP8L1Q8WVP5 186 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 THOC3Q96J01 351 aaKnown RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 INSM2Q96T92 566 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 FN3KRPQ9HA64 309 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 RHOFQ9HBH0 211 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM138Q9NPI0 162 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 MED17Q9NVC6 651 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ASB6Q9NWX5 421 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 IL17CQ9P0M4 197 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF282Q9UDV7 671 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 CACFD1Q9UGQ2 172 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 CAMK2AQ9UQM7 478 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 EXOSC1Q9Y3B2 195 aaKnown RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 C7orf77A4D0Y5 90 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 F5H0A9 414 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 PGRMC2O15173 223 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 YY2O15391 372 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 CA11O75493 328 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RLN1P04808 185 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SOD3P08294 240 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 EN2P19622 333 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 HNF1AP20823 631 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 MNDAP41218 407 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RAB40BQ12829 278 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 AWAT1Q58HT5 328 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 MESTQ5EB52 335 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SMARCD3Q6STE5 483 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 ANKRD33Q7Z3H0 272 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RTN4RL1Q86UN2 441 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 ANGPTL5Q86XS5 388 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF664Q8N3J9 261 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 OR10AD1Q8NGE0 317 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 NEK7Q8TDX7 302 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 FAM122AQ96E09 287 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 C20orf24Q9BUV8 137 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SLITRK2Q9H156 845 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 HRH4Q9H3N8 390 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 CCDC86Q9H6F5 360 aaKnown RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 BPIFA1Q9NP55 256 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 GPR52Q9Y2T5 361 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM210A6NLX4 147 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 OR2AT4A6NND4 320 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RDH16O75452 317 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 ITGA10O75578 1167 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 TMIGD3P0DMS9 266 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 NME2P22392 152 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 TDGF1P3P51864 188 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SHC2P98077 582 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 MST1LQ2TV78 715 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SLC25A30Q5SVS4 291 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 FRG2Q64ET8 278 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 SLC36A1Q7Z2H8 476 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 C22orf15Q8WYQ4 148 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 FRG2BQ96QU4 278 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 MENTQ9BUN1 341 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 POLR2J3Q9H1A7 115 aaKnown RBP10.91□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM38AQ9H6F2 299 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 OR14J1Q9UGF5 321 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 KCND3Q9UK17 655 aa10.91□□□□□ -0.66
SHMT2-201ENST00000328923 FBXL4Q9UKA2 621 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms