RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SLC22A11Q9NSA0 550 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 C2orf42Q9NWW7 574 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 CARHSP1Q9Y2V2 147 aaKnown RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ATG4BQ9Y4P1 393 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 TSPAN11A1L157 253 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 H0YC42 278 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 K7ESM1 405 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 SGCEO43556 437 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 GPRIN2O60269 458 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 RBBP9O75884 186 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR2T7P0C7T2 308 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 ITPKBP27987 946 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 NAA10P41227 235 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-201ENST00000327554 NR0B1P51843 470 aaKnown RBP11.73□□□□□ -0.53
CCDC60-201ENST00000327554 SNTB1Q13884 538 aaKnown RBP11.73□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF345Q14585 488 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 POM121L1PQ3SYA9 428 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 USP50Q70EL3 339 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-201ENST00000327554 KRT77Q7Z794 578 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.73□□□□□ -0.53
CCDC60-201ENST00000327554 SDR9C7Q8NEX9 313 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR2T27Q8NH04 317 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR6S1Q8NH40 331 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR4C6Q8NH72 309 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 RPS4Y2Q8TD47 263 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 C15orf40Q8WUR7 153 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 BPIFA2Q96DR5 249 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 OR52A5Q9H2C5 316 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 KLHL31Q9H511 634 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 BRCA2P51587 3418 aa11.73□□□□□ -0.53
CCDC60-201ENST00000327554 LRIT2A6NDA9 550 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 POP7O75817 140 aaKnown RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 STATHP02808 62 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 CTSLP07711 333 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ELFN1P0C7U0 828 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 C4orf46Q504U0 113 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 CST9Q5W186 159 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF704Q6ZNC4 412 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SLC16A13Q7RTY0 426 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SLC35F2Q8IXU6 374 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 DND1Q8IYX4 353 aaKnown RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SPAG16Q8N0X2 631 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 OR51A7Q8NH64 312 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SNX33Q8WV41 574 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 CRB3Q9BUF7 120 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 MRI1Q9BV20 369 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ZFP57Q9NU63 452 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ASF1BQ9NVP2 202 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SPHK1Q9NYA1 384 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 MKL2Q9ULH7 1088 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ETV7Q9Y603 341 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 A0A087WV48 116 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SULT1C2O00338 296 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 YKT6O15498 198 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 OR2F2O95006 317 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 PAPLNO95428 1278 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 EFEMP2O95967 443 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SMIM6P0DI80 62 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 F3P13726 295 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ADRA2CP18825 462 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 PTGFRP43088 359 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 NPBWR1P48145 328 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 OR2F1Q13607 317 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 MRM1Q6IN84 353 aaKnown RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 OR2L13Q8N349 312 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 OR51L1Q8NGJ5 315 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 NXPE3Q969Y0 559 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 CNN2Q99439 309 aaKnown RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF251Q9BRH9 671 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 WSB2Q9NYS7 404 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 NCDNQ9UBB6 729 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 PCYT1BQ9Y5K3 369 aaPredicted RBP11.72□□□□□ -0.53
CCDC60-201ENST00000327554 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
CCDC60-201ENST00000327554 A0A1W2PPV9 198 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 OR6C76A6NM76 312 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 IDSB3KWA1 339 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 AIFM1O95831 613 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 ACTL6AO96019 429 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 CSF1P09603 554 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms