RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 HTRA1Q92743 480 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 MAL2Q969L2 176 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 RHNO1Q9BSD3 238 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 PAIP1Q9H074 479 aaKnown RBP12.37□□□□□ -0.43
RPAIN-201ENST00000327154 PIF1Q9H611 641 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 CCDC134Q9H6E4 229 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 ATP23Q9Y6H3 246 aa12.37□□□□□ -0.43
RPAIN-201ENST00000327154 NR5A2O00482 541 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 FRS3O43559 492 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 KRT33AO76009 404 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 TP53P04637 393 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-201ENST00000327154 P2RY4P51582 365 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 NUDT6P53370 316 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 LGALS3BPQ08380 585 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 SQLEQ14534 574 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 RAB35Q15286 201 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 HIKESHIQ53FT3 197 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 CGB2Q6NT52 195 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 C3orf49Q96BT1 292 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 SLC25A36Q96CQ1 311 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 FKRPQ9H9S5 495 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 CCDC167Q9P0B6 97 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
RPAIN-201ENST00000327154 IGHV4-30-2A0A087WSY4 118 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 NPIPB7O75200 414 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 VAMP5O95183 116 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 MRPL19P49406 292 aaKnown RBP12.35□□□□□ -0.43
RPAIN-201ENST00000327154 SELENOPP49908 381 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 ATP4BP51164 291 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 ARFIP2P53365 341 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 AGKQ53H12 422 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 PRAMEF8Q5VWM4 474 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 PRAMEF7Q5VXH5 474 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 ZNF544Q6NX49 715 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 KDM8Q8N371 416 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 OR10H5Q8NGA6 315 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 STK35Q8TDR2 534 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 RAD21L1Q9H4I0 556 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 TMEM45AQ9NWC5 275 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
RPAIN-201ENST00000327154 A0A096LPI6 279 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 CD5LO43866 347 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 GPRIN2O60269 458 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 AHSA1O95433 338 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 LGI1O95970 557 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 WNT11O96014 354 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 BMP2P12643 396 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 APOBEC3AP31941 199 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-201ENST00000327154 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
RPAIN-201ENST00000327154 C1QTNF12Q5T7M4 302 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 CLEC2AQ6UVW9 174 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 ABHD12BQ7Z5M8 362 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-201ENST00000327154 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 BBS10Q8TAM1 723 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 SPDL1Q96EA4 605 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 KTI12Q96EK9 354 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-201ENST00000327154 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 RSPO3Q9BXY4 272 aaPredicted RBP12.34□□□□□ -0.43
RPAIN-201ENST00000327154 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 RPS6KB2Q9UBS0 482 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 ALPK2Q86TB3 2170 aa12.34□□□□□ -0.43
RPAIN-201ENST00000327154 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-201ENST00000327154 FTCDNL1E5RQL4 147 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 ZNF587BE7ETH6 402 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-201ENST00000327154 UPK3AO75631 287 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 PNMTP11086 282 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 BMP4P12644 408 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 HOXB9P17482 250 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-201ENST00000327154 GYS2P54840 703 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 DSCR9P59020 149 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 EGR4Q05215 589 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 CHRNB3Q05901 458 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 FADDQ13158 208 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 TBRG1Q3YBR2 411 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 BLOC1S3Q6QNY0 202 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 LINGO2Q7L985 606 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 MSRB3Q8IXL7 192 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 ZNF525Q8N782 197 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
RPAIN-201ENST00000327154 NFKBIDQ8NI38 313 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms