RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MAGEB4O15481 346 aaPredicted RBP20.41■□□□□ 0.86
PNKP-201ENST00000322344 LANCL1O43813 399 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 LCN1P31025 176 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 SLC6A19Q695T7 634 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 ASB18Q6ZVZ8 466 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 C10orf53Q8N6V4 93 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 GATSQ8NAP1 163 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 OR1F2PQ96R84 312 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 LMF1Q96S06 567 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 SLA2Q9H6Q3 261 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 NIPAL2Q9H841 368 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 C2orf42Q9NWW7 574 aa20.41■□□□□ 0.86
PNKP-201ENST00000322344 UTS2O95399 124 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 TFPIP10646 304 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 SRFP11831 508 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 AQP2P41181 271 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 CCR4P51679 360 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 EPHA4P54764 986 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 GXYLT1Q4G148 440 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 LINC01590Q5TEZ4 76 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 KCTD20Q7Z5Y7 419 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 TMEM151BQ8IW70 566 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 SLC35F3Q8IY50 421 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 YIPF7Q8N8F6 280 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 LRRC75AQ8NAA5 344 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 OR5H6Q8NGV6 325 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 ZPLD1Q8TCW7 415 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 HAVCR2Q8TDQ0 301 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 LCORQ96JN0 433 aaPredicted RBP20.4■□□□□ 0.86
PNKP-201ENST00000322344 ALG12Q9BV10 488 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 BEX2Q9BXY8 128 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 ZNF576Q9H609 170 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 PNO1Q9NRX1 252 aaKnown RBP20.4■□□□□ 0.86
PNKP-201ENST00000322344 CUTCQ9NTM9 273 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 SPATA2Q9UM82 520 aa20.4■□□□□ 0.86
PNKP-201ENST00000322344 BLOC1S5-TXNDC5H3BN57 136 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 PDCD5O14737 125 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 TXNDC12O95881 172 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 MMP15P51511 669 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 AGFG1P52594 562 aaKnown RBP20.39■□□□□ 0.86
PNKP-201ENST00000322344 ALG10Q5BKT4 473 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 EMC4Q5J8M3 183 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 OGFOD3Q6PK18 319 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 UTS2BQ765I0 119 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 FAM122BQ7Z309 247 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 SDR16C5Q8N3Y7 309 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 AKAP1Q92667 903 aaKnown RBP eCLIP20.39■□□□□ 0.86
PNKP-201ENST00000322344 MVB12AQ96EY5 273 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 Q96M85 177 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 OR14A2Q96R54 314 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 TMEM246Q9BRR3 403 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 PCED1AQ9H1Q7 454 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 MMP25Q9NPA2 562 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 BRD7Q9NPI1 651 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 RXFP3Q9NSD7 469 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 CAMK2AQ9UQM7 478 aa20.39■□□□□ 0.86
PNKP-201ENST00000322344 A0A1B0GTQ1 180 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 OR6C70A6NIJ9 312 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 OIP5O43482 229 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 SDHAP31040 664 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 CDKN2AP42771 156 aaKnown RBP20.39■□□□□ 0.85
PNKP-201ENST00000322344 SLC6A8P48029 635 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 RACK1P63244 317 aaKnown RBP20.39■□□□□ 0.85
PNKP-201ENST00000322344 YIF1BQ5BJH7 314 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 SLC16A9Q7RTY1 509 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 NXF5Q9H1B4 397 aaKnown RBP20.39■□□□□ 0.85
PNKP-201ENST00000322344 LMAN1LQ9HAT1 526 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 ZNF281Q9Y2X9 895 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 MAU2Q9Y6X3 613 aa20.39■□□□□ 0.85
PNKP-201ENST00000322344 A0A1W2PPK0 400 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 LMO7DNF2Z398 122 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 CPNE3O75131 537 aaKnown RBP20.38■□□□□ 0.85
PNKP-201ENST00000322344 C1QBP02746 253 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 TACSTD2P09758 323 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 ASAH2BP0C7U1 165 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 SNRPBP14678 240 aaKnown RBP20.38■□□□□ 0.85
PNKP-201ENST00000322344 DCAF7P61962 342 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 MRPL28Q13084 256 aaKnown RBP20.38■□□□□ 0.85
PNKP-201ENST00000322344 NTRK2Q16620 822 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 C14orf28Q4W4Y0 310 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 GHDCQ8N2G8 530 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 EXD3Q8N9H8 876 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 DTX3Q8N9I9 347 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 C7orf50Q9BRJ6 194 aaKnown RBP20.38■□□□□ 0.85
PNKP-201ENST00000322344 YIPF2Q9BWQ6 316 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 LAT2Q9GZY6 243 aa20.38■□□□□ 0.85
PNKP-201ENST00000322344 A0A1B0GVC2 190 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 A6NIN4 97 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 UQCRC1P31930 480 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 PSMB10P40306 273 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 CTXN1P60606 82 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 HNRNPKP61978 463 aaKnown RBP eCLIP20.37■□□□□ 0.85
PNKP-201ENST00000322344 ZNF684Q5T5D7 378 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 CARFQ8N187 725 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 ADAMTS14Q8WXS8 1223 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 PDCD1LG2Q9BQ51 273 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 DPAGT1Q9H3H5 408 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 TDRD6O60522 2096 aaKnown RBP20.37■□□□□ 0.85
PNKP-201ENST00000322344 IGKV3D-11A0A0A0MRZ8 115 aa20.37■□□□□ 0.85
PNKP-201ENST00000322344 RHPN2P1A8MT19 583 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms