RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TO15178 435 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 PLPP2O43688 288 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 WISP1O95388 367 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 SPI1P17947 270 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CXCR1P25024 350 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CDKN2AP42771 156 aaKnown RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 PNLIPRP2P54317 469 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 RNF4P78317 190 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 LGALS3BPQ08380 585 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 BAK1Q16611 211 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 FAM27D1Q5T7N8 215 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 C1QL3Q5VWW1 255 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 OR5M10Q6IEU7 315 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 LEG1Q6P5S2 330 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 OR4D9Q8NGE8 314 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 SNX33Q8WV41 574 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 LRFN5Q96NI6 719 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CCNL2Q96S94 520 aaPredicted RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 CNN2Q99439 309 aaKnown RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 LPAR4Q99677 370 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ADAM19Q9H013 955 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 PPIL3Q9H2H8 161 aaKnown RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 RPRD1BQ9NQG5 326 aaKnown RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 RARRES3Q9UL19 164 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CEP192Q8TEP8 1941 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 SELENOFO60613 162 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 TMCC2O75069 709 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 HEXBP07686 556 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CD14P08571 375 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 OR2T7P0C7T2 308 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ASAH2BP0C7U1 165 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CD53P19397 219 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 F8A1P23610 371 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 HOXA6P31267 233 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 SLC6A8P48029 635 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 DIO1P49895 249 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ZXDAP98168 799 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CD300CQ08708 224 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 GDPD3Q7L5L3 318 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 OR2T27Q8NH04 317 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 DUSP19Q8WTR2 217 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 GHSRQ92847 366 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 TAAR8Q969N4 342 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 DDOQ99489 341 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 CPNE5Q9HCH3 593 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ZNF346Q9UL40 294 aaKnown RBP6.89□□□□□ -1.31
IFT88-201ENST00000319980 PI4KAP42356 2102 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 ALPK2Q86TB3 2170 aa6.89□□□□□ -1.31
IFT88-201ENST00000319980 EML5Q05BV3 1969 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 OR6C76A6NM76 312 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PSMD9O00233 223 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 LAMTOR5O43504 91 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 IDH3BO43837 385 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 GDF9O60383 454 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PTTG1O95997 202 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 HIST1H2ABP04908 130 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SPNP16150 400 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SHC1P29353 583 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 GRPRP30550 384 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 EVI2BP34910 448 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 TAS2R43P59537 309 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 DCDP81605 110 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 RPL18Q07020 188 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 CARTPTQ16568 116 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PHF19Q5T6S3 580 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 HIST3H2AQ7L7L0 130 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NANOGNBQ7Z5D8 188 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 CEACAM19Q7Z692 300 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NR2C2APQ86WQ0 139 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SLC35F2Q8IXU6 374 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 POMGNT2Q8NAT1 580 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 APCDD1LQ8NCL9 501 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 LSM14AQ8ND56 463 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 ABHD4Q8TB40 342 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 METTL21AQ8WXB1 218 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 HIST1H2ACQ93077 130 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 GPX7Q96SL4 187 aaPredicted RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 SMAD5Q99717 465 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 SRRQ9GZT4 340 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SRA1Q9HD15 236 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 GRHPRQ9UBQ7 328 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 TRAPPC4Q9Y296 219 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NOX1Q9Y5S8 564 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 IGLV3-12A0A075B6K2 115 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 A0A1W2PPK0 400 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 A0A1W2PQD3 144 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 A0A1W2PRG6 482 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 HTR3EA5X5Y0 456 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 H7C1C5 153 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SSX4O60224 188 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 EIF4E2O60573 245 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 HPGDSO60760 199 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms