RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 C17orf78Q8N4C9 275 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF383Q8NA42 475 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ACTRT1Q8TDG2 376 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 GPX8Q8TED1 209 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ATG4CQ96DT6 458 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 KCNMB3Q9NPA1 279 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ENPP5Q9UJA9 477 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 AUP1Q9Y679 476 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ADAMTS12P58397 1594 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 SLC25A17O43808 307 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 PTHP01270 115 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 TNFSF8P32971 234 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 UBE2NP61088 152 aaKnown RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 HTRA3P83110 453 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 OR10A7Q8NGE5 316 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 OR9A4Q8NGU2 314 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 TWIST2Q8WVJ9 160 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 CELF1Q92879 486 aaKnown RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 POP5Q969H6 163 aaKnown RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF764Q96H86 408 aaPredicted RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF641Q96N77 438 aaPredicted RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 RBP7Q96R05 134 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 MRPL57Q9BQC6 102 aaKnown RBP7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 SYT17Q9BSW7 474 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 KCNK15Q9H427 330 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 ISYNA1Q9NPH2 558 aa7.15□□□□□ -1.26
LIMCH1-201ENST00000313860 A0A1W2PPM1 405 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 B3GALT2O43825 422 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 APODP05090 189 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 CTSAP10619 480 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 DHPSP49366 369 aaPredicted RBP7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 PLA2G16P53816 162 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 SELPLGQ14242 412 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 CPZQ66K79 652 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 OR13F1Q8NGS4 319 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 PHOSPHO1Q8TCT1 267 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 PRR11Q96HE9 360 aaPredicted RBP7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ZNF583Q96ND8 569 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 OR1F2PQ96R84 312 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 HHATLQ9HCP6 504 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ZNF281Q9Y2X9 895 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ZNF736B4DX44 427 aaPredicted RBP7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 LGALS8O00214 317 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ABHD16AO95870 558 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ADRB1P08588 477 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ACSM4P0C7M7 580 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 HIST1H1CP16403 213 aaKnown RBP7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 SDHAP31040 664 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 CCR7P32248 378 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 CRISP3P54108 245 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 HBG2P69892 147 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 CDK18Q07002 472 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 PGGHGQ32M88 737 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 LRIT3Q3SXY7 679 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 ZNF66Q6ZN08 573 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 SLC5A5Q92911 643 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 DUSP9Q99956 384 aaKnown RBP7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 FZD1Q9UP38 647 aa7.15□□□□□ -1.27
LIMCH1-201ENST00000313860 TMEM82A0PJX8 343 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 C9J4A7 227 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ABCD4O14678 606 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 HSD17B6O14756 317 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 SLC25A14O95258 325 aaPredicted RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 PPP1R17O96001 155 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ADRA2AP08913 450 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 CRHR1P34998 444 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 SRYQ05066 204 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D26Q86UD7 250 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 SGMS1Q86VZ5 419 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 AGBL5Q8NDL9 886 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 RAET1EQ8TD07 263 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ABHD3Q8WU67 409 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ASB5Q8WWX0 329 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 COL3A1P02461 1466 aaPredicted RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 HIDE1A8MVS5 230 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 B4DEV8 164 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 GLCEO94923 617 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 CLDN9O95484 217 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 FCGR2AP12318 317 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 JUNBP17275 347 aaPredicted RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 TACR3P29371 465 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ARRB2P32121 409 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 RPS15P62841 145 aaKnown RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 LTBQ06643 244 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ST3GAL3Q11203 375 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ZNF506Q5JVG8 444 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 FAM71E1Q6IPT2 247 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 Q6ZRG5 221 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 PIWIL3Q7Z3Z3 882 aaKnown RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 ZDHHC14Q8IZN3 488 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 CPA6Q8N4T0 437 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 DIO2Q92813 273 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 TMBIM1Q969X1 311 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 SLC46A1Q96NT5 459 aa7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 LMF2Q9BU23 707 aaKnown RBP7.14□□□□□ -1.27
LIMCH1-201ENST00000313860 IKZF4Q9H2S9 585 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms