RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RANBP3LQ86VV4 465 aaPredicted RBP10.65□□□□□ -0.71
SCFD1-201ENST00000311943 TMEM200AQ86VY9 491 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 PROX1Q92786 737 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 S100PBPQ96BU1 408 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 SLC41A3Q96GZ6 507 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 TXNDC15Q96J42 360 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 TRAPPC4Q9Y296 219 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.71
SCFD1-201ENST00000311943 AQP7P3A6NL99 342 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 hCG_2039718K7EN88 272 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 CTAG2O75638 210 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 UBOX5O94941 541 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 AHSA1O95433 338 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 CH25HO95992 272 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 PLAUP00749 431 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 BGLAPP02818 100 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 MT-ND1P03886 318 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 GPIP06744 558 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 C8BP07358 591 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 SLC35A1P78382 337 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 MS4A2Q01362 244 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 FAPQ12884 760 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 PHYHD1Q5SRE7 291 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 TMEM225Q6GV28 225 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 PAQR6Q6TCH4 344 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 CYP2R1Q6VVX0 501 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 C10orf53Q8N6V4 93 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 OR9K2Q8NGE7 335 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 HTRA1Q92743 480 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 FAM162AQ96A26 154 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 SLC47A1Q96FL8 570 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 C1QTNF6Q9BXI9 259 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 MAN2C1Q9NTJ4 1040 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 MRGBPQ9NV56 204 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 MED29Q9NX70 200 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 RIMS3Q9UJD0 308 aa10.64□□□□□ -0.71
SCFD1-201ENST00000311943 IGKV3D-15A0A087WSY6 115 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 C16orf97H3BN30 126 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 OR3A2P47893 321 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 EEF1A1P5Q5VTE0 462 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CASP12Q6UXS9 341 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CREB3L2Q70SY1 520 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 FKBP9P1Q75LS8 142 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CBLL1Q75N03 491 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 PGAM4Q8N0Y7 254 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 UBE2J2Q8N2K1 259 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 SLC43A2Q8N370 569 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 NSL1Q96IY1 281 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 TAPBPLQ9BX59 468 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ACTR6Q9GZN1 396 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ROS1P08922 2347 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 OTOGQ6ZRI0 2925 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 TRAPPC13A5PLN9 417 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 DEFB108AA8MXU0 73 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 C11orf98E9PRG8 122 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CHP2O43745 196 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 UPK3AO75631 287 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 RAD51DO75771 328 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 SEC14L2O76054 403 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 EPXP11678 715 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ATP6V1B2P21281 511 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 DNAJA1P31689 397 aaKnown RBP10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
SCFD1-201ENST00000311943 TAS2R41P59536 307 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 VLDLRP98155 873 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 FAM69AQ5T7M9 428 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 CARD17Q5XLA6 110 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 FAM91A1Q658Y4 838 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 GTF2IRD2BQ6EKJ0 949 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ARPINQ7Z6K5 226 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 GALNT5Q7Z7M9 940 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 GTF2IRD2Q86UP8 949 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF100Q8IYN0 542 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 MFSD8Q8NHS3 518 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 STK35Q8TDR2 534 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 DNAJA4Q8WW22 397 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-201ENST00000311943 SLC35B4Q969S0 331 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-201ENST00000311943 MED18Q9BUE0 208 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 TAS2R1Q9NYW7 299 aa10.63□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-201ENST00000311943 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 A6NNC1 897 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF724A8MTY0 619 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ARPC2O15144 300 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 PRSS23O95084 383 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ITGA5P08648 1049 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 SLC16A1P53985 500 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 CLDN17P56750 224 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 PPP1R8Q12972 351 aaKnown RBP10.62□□□□□ -0.71
SCFD1-201ENST00000311943 KRT72Q14CN4 511 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 TAB1Q15750 504 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 STK11Q15831 433 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZSWIM7Q19AV6 140 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 IQCCQ4KMZ1 466 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 SFRP5Q5T4F7 317 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 ZNF613Q6PF04 617 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 SEZ6L2Q6UXD5 910 aa10.62□□□□□ -0.71
SCFD1-201ENST00000311943 SLC46A3Q7Z3Q1 461 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms