RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SEC61A1P61619 476 aaKnown RBP14.46□□□□□ -0.1
HCFC1-201ENST00000310441 VASNQ6EMK4 673 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 ZC3H3Q8IXZ2 948 aaKnown RBP14.46□□□□□ -0.1
HCFC1-201ENST00000310441 VN1R3Q9BXE9 311 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 ARNT2Q9HBZ2 717 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 GMPR2Q9P2T1 348 aaKnown RBP14.46□□□□□ -0.1
HCFC1-201ENST00000310441 PPP5D1E7EU14 171 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 IL1RNP18510 177 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 TACR1P25103 407 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 HOXC13P31276 330 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 POU4F3Q15319 338 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 USP51Q70EK9 711 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF595Q8IYB9 648 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 OR7G3Q8NG95 312 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 RBFOX1Q9NWB1 397 aaKnown RBP14.46□□□□□ -0.1
HCFC1-201ENST00000310441 CSNK1G3Q9Y6M4 447 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 RAB5AP20339 215 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 CRMP1Q14194 572 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NR0B2Q15466 257 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 SLC51BQ86UW2 128 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MED30Q96HR3 178 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ACKR4Q9NPB9 350 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MUTYHQ9UIF7 546 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 TRAPPC2LQ9UL33 140 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 CBLCQ9ULV8 474 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MYO16Q9Y6X6 1858 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF840PA6NDX5 716 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 CACNG3O60359 315 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 FJX1Q86VR8 437 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 CD200R1Q8TD46 325 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ATF6BQ99941 703 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 INPP5KQ9BT40 448 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 EPHX3Q9H6B9 360 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 USP36Q9P275 1121 aaKnown RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ADAM29Q9UKF5 820 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 OLIG2Q13516 323 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 HHIPL1Q96JK4 782 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF251Q9BRH9 671 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 SLC25A18Q9H1K4 315 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 C1GALT1Q9NS00 363 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ACSS1Q9NUB1 689 aaPredicted RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 WNT11O96014 354 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 C3orf38Q5JPI3 329 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 BTNL8Q6UX41 500 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 TCTE3Q8IZS6 198 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 CPXM2Q8N436 756 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 SMG9Q9H0W8 520 aaKnown RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MYEF2Q9P2K5 600 aaKnown RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 EMC9Q9Y3B6 208 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF541Q9H0D2 1346 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 GABRPO00591 440 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 TNFSF12O43508 249 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 SPP1P10451 314 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 PAX6P26367 422 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NPSR1Q6W5P4 371 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 Q6ZRG5 221 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NDUFAF7Q7L592 441 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 SLC22A24Q8N4F4 322 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NPRL2Q8WTW4 380 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 TMEM184BQ9Y519 407 aaPredicted RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MTHFD2P13995 350 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 RFX2P48378 723 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 RNF144AP50876 292 aaPredicted RBP14.45□□□□□ -0.1
HCFC1-201ENST00000310441 PGGHGQ32M88 737 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 OR10K1Q8NGX5 313 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NME4O00746 187 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 FBXO24O75426 580 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 MBP02144 154 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 HOXB5P09067 269 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NAGAP17050 411 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 HTR2CP28335 458 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 GABRA2P47869 451 aa14.45□□□□□ -0.1
HCFC1-201ENST00000310441 NUDT21O43809 227 aaKnown RBP14.44□□□□□ -0.1
HCFC1-201ENST00000310441 PSMB1P20618 241 aaKnown RBP14.44□□□□□ -0.1
HCFC1-201ENST00000310441 DCTP40126 519 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 DMWDQ09019 674 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 FAM111BQ6SJ93 734 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 CNEP1R1Q8N9A8 125 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 PIN1Q13526 163 aaPredicted RBP14.44□□□□□ -0.1
HCFC1-201ENST00000310441 P2RY14Q15391 338 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 PIP5KL1Q5T9C9 394 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF425Q6IV72 752 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 SYT13Q7L8C5 426 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 FAM122BQ7Z309 247 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 LYSMD1Q96S90 227 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 FAM96BQ9Y3D0 163 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 TMEM221A6NGB7 291 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 ERVPABLB-1P60509 514 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 SLC35G3Q8N808 338 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 TSACCQ96A04 125 aaPredicted RBP14.44□□□□□ -0.1
HCFC1-201ENST00000310441 BOD1Q96IK1 185 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 SMIM3Q9BZL3 60 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 GIMAP2Q9UG22 337 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 A0A1W2PQ09 198 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF587BE7ETH6 402 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 TAAR5O14804 337 aa14.44□□□□□ -0.1
HCFC1-201ENST00000310441 TIMM8AO60220 97 aaPredicted RBP14.44□□□□□ -0.1
HCFC1-201ENST00000310441 GRB2P62993 217 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms