RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CSNK2A1P68400 391 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 TBCEQ15813 527 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF141Q15928 474 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SYPL1Q16563 259 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 FRMPD2BQ6IN97 320 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SMARCD3Q6STE5 483 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 KLHL24Q6TFL4 600 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF793Q6ZN11 406 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ETV3LQ6ZN32 361 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 UBE3DQ7Z6J8 389 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 MSRB3Q8IXL7 192 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZFP82Q8N141 532 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 MAL2Q969L2 176 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SH3YL1Q96HL8 342 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 RBP7Q96R05 134 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 HDHD5Q9BXW7 423 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 GPR87Q9BY21 358 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 COMMD4Q9H0A8 199 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 C19orf12Q9NSK7 152 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ASB6Q9NWX5 421 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 TAS2R3Q9NYW6 316 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CES1P1Q9UKY3 287 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SH2B3Q9UQQ2 575 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 POLR1DQ9Y2S0 133 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 GBF1Q92538 1859 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 LOC105369274A0A096LPK9 316 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 LOC102723532A0A0G2JNH3 316 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 NPIPA5E9PKD4 350 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 H3BMQ9 156 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ACOT7O00154 380 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 UPK1AO00322 258 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SLC1A7O00341 560 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 HMGB3O15347 200 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 FGF17O60258 216 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CTSVO60911 334 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 LDB3O75112 727 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SULT1C4O75897 302 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ARL6IP5O75915 188 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 MT-ND1P03886 318 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CD36P16671 472 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PTBP1P26599 531 aaKnown RBP eCLIP5.53□□□□□ -1.525e-8■■■■■ 27.6
SEC22A-201ENST00000309934 CRABP1P29762 137 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PEBP1P30086 187 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PIGAP37287 484 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ADH7P40394 386 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 APOBEC1P41238 236 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ID2Q02363 134 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PUM1Q14671 1186 aaKnown RBP eCLIP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 OR1Q1Q15612 314 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF181Q2M3W8 571 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ENTPD8Q5MY95 495 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 THEM4Q5T1C6 240 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 DDI2Q5TDH0 399 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 AHSA2Q719I0 299 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SHFQ7M4L6 423 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CPEB2Q7Z5Q1 589 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PXKQ7Z7A4 578 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF761Q86XN6 746 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 OR4N4Q8N0Y3 316 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 RNF175Q8N4F7 328 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 TMEM163Q8TC26 289 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SENP5Q96HI0 755 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SGCZQ96LD1 299 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 DDA1Q9BW61 102 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CNIH4Q9P003 139 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 BOKQ9UMX3 212 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 NPIPA1Q9UND3 350 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF106Q9H2Y7 1883 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 LOC390937A0A1W2PQ73 354 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 DAPL1A0PJW8 107 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF726A6NNF4 738 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 C21orf140B9A014 251 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ATE1O95260 518 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 STATHP02808 62 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 STSP08842 583 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 RAB40ALP0C0E4 278 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SMIM6P0DI80 62 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 TBXA2RP21731 343 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ELAVL4P26378 380 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 GZMMP51124 257 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 SSR4P51571 173 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 RPS26P62854 115 aaKnown RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 CDK5R2Q13319 367 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 RAB39AQ14964 217 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 TAF13Q15543 124 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PRICKLE4Q2TBC4 344 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 PYDC2Q56P42 97 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ABHD17BQ5VST6 288 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 KCTD18Q6PI47 426 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-201ENST00000309934 BAIAP2L2Q6UXY1 529 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 WDR88Q6ZMY6 472 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 MCEMP1Q8IX19 187 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 OR4N5Q8IXE1 308 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 OR1N1Q8NGS0 311 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF596Q8TC21 504 aa5.53□□□□□ -1.52
SEC22A-201ENST00000309934 STK35Q8TDR2 534 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms