RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 C5orf34Q96MH7 638 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 PIGQQ9BRB3 760 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 KATNB1Q9BVA0 655 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.32■□□□□ 0.841e-8■■■■□ 22.4
IRF3-201ENST00000309877 FN3KQ9H479 309 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 NRIP3Q9NQ35 241 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CORINQ9Y5Q5 1042 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 PINLYPA6NC86 204 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 FTCDNL1E5RQL4 147 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 PRODHO43272 600 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 EFSO43281 561 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 IDH3BO43837 385 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 MRPS14O60783 128 aaKnown RBP20.32■□□□□ 0.84
IRF3-201ENST00000309877 SP1P08047 785 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CD14P08571 375 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 HTR1AP08908 422 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 TSPAN19P0C672 248 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CD46P15529 392 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 ZNF17P17021 662 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 ZNF3P17036 446 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CLK1P49759 484 aaKnown RBP20.32■□□□□ 0.84
IRF3-201ENST00000309877 CTXN1P60606 82 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CPOQ8IVL8 374 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 SULF2Q8IWU5 870 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 MDS2Q8NDY4 140 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 FDCSPQ8NFU4 85 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 OR14L1PQ8NHC6 308 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 HAS2Q92819 552 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 RFKQ969G6 155 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 UBL7Q96S82 380 aaPredicted RBP20.32■□□□□ 0.84
IRF3-201ENST00000309877 HES7Q9BYE0 225 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 CNOT2Q9NZN8 540 aaKnown RBP20.32■□□□□ 0.84
IRF3-201ENST00000309877 KLHL21Q9UJP4 597 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 KLF13Q9Y2Y9 288 aaPredicted RBP20.32■□□□□ 0.84
IRF3-201ENST00000309877 ADAM18Q9Y3Q7 739 aa20.32■□□□□ 0.84
IRF3-201ENST00000309877 OR2M5A3KFT3 312 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 KDM4EB2RXH2 506 aaPredicted RBP20.31■□□□□ 0.84
IRF3-201ENST00000309877 M0R082 166 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 ARPC3O15145 178 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 OPN1LWP04000 364 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 F13BP05160 661 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 RFPL3SP0C7P2 107 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 ADORA3P0DMS8 318 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 GDF1P27539 372 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 FOXO1Q12778 655 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 PRSS48Q7RTY5 328 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 LRRC75AQ8NAA5 344 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 FAM98AQ8NCA5 519 aaKnown RBP20.31■□□□□ 0.84
IRF3-201ENST00000309877 ZNF417Q8TAU3 575 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 OR5B2Q96R09 309 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 ZNF587Q96SQ5 575 aaPredicted RBP20.31■□□□□ 0.84
IRF3-201ENST00000309877 HINT3Q9NQE9 182 aaKnown RBP20.31■□□□□ 0.84
IRF3-201ENST00000309877 FKBP14Q9NWM8 211 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 MRPL39Q9NYK5 338 aaKnown RBP20.31■□□□□ 0.84
IRF3-201ENST00000309877 B4GALT7Q9UBV7 327 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 SEC14L4Q9UDX3 406 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 CPAMD8Q8IZJ3 1885 aa20.31■□□□□ 0.84
IRF3-201ENST00000309877 PRR23D1E9PI22 279 aaPredicted RBP20.3■□□□□ 0.84
IRF3-201ENST00000309877 C11orf98E9PRG8 122 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 RNF13O43567 381 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 TRAPPC6AO75865 159 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 PRR23D2P0DMB1 279 aaPredicted RBP20.3■□□□□ 0.84
IRF3-201ENST00000309877 DBTP11182 482 aaKnown RBP20.3■□□□□ 0.84
IRF3-201ENST00000309877 IMPDH2P12268 514 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 AHCYP23526 432 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 SFTPDP35247 375 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 ZNF91Q05481 1191 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 ST3GAL4Q11206 333 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 MYBPHQ13203 477 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 TMEM176BQ3YBM2 270 aaPredicted RBP20.3■□□□□ 0.84
IRF3-201ENST00000309877 AADACL4Q5VUY2 407 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 NXNL2Q5VZ03 156 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 PLBD1Q6P4A8 553 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 YRDCQ86U90 279 aaKnown RBP20.3■□□□□ 0.84
IRF3-201ENST00000309877 OR52E2Q8NGJ4 325 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 OR4K13Q8NH42 304 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 TAS2R5Q9NYW4 299 aa20.3■□□□□ 0.84
IRF3-201ENST00000309877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.3■□□□□ 0.846e-8■□□□□ 9.9
IRF3-201ENST00000309877 FREM2Q5SZK8 3169 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 A6NHS1 94 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 LIPT2A6NK58 231 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 FAM183AA6NL82 134 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 KLRC4-KLRK1H3BQV0 150 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 M0R3G1 203 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 NME2P1O60361 137 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 MT-ND2P03891 347 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 CDK1P06493 297 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 PIPP12273 146 aaPredicted RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 APEHP13798 732 aaKnown RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 HIST1H1CP16403 213 aaKnown RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 PAICSP22234 425 aaKnown RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 NME2P22392 152 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 ACVR2AP27037 513 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 SLC15A1P46059 708 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 CDH11P55287 796 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 GID4Q8IVV7 300 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 SVOPQ8N4V2 548 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 SCAIQ8N9R8 606 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 SNIP1Q8TAD8 396 aaKnown RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 ALKBH4Q9NXW9 302 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms