RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 OR5M10Q6IEU7 315 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 MS4A15Q8N5U1 240 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 NPEPL1Q8NDH3 523 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 OR8K3Q8NH51 312 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 PTPMT1Q8WUK0 201 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ZDHHC12Q96GR4 267 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 DPYSL5Q9BPU6 564 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ALG12Q9BV10 488 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 MCUBQ9NWR8 336 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 NCDNQ9UBB6 729 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 TP53BP1Q12888 1972 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF264O43296 627 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ICOSLGO75144 302 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ACTA2P62736 377 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ACTG2P63267 376 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 CDK5R1Q15078 307 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TCTE1Q5JU00 501 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 BCL2L15Q5TBC7 163 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 CEP76Q8TAP6 659 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 KTI12Q96EK9 354 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 JAM3Q9BX67 310 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 NKIRAS2Q9NYR9 191 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 NPAP1Q9NZP6 1156 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 IGHV3-20A0A0C4DH32 117 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ORC5O43913 435 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 HIST1H2ABP04908 130 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 DDOSTP39656 456 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 SERTAD2Q14140 314 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 GPR176Q14439 515 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 SF3A2Q15428 464 aaKnown RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 HSD17B12Q53GQ0 312 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 C1QL3Q5VWW1 255 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 METAP1DQ6UB28 335 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 HIST3H2AQ7L7L0 130 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 MARCH3Q86UD3 253 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 YIPF7Q8N8F6 280 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 HIST1H2ACQ93077 130 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 PMEPA1Q969W9 287 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 SMIM19Q96E16 107 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 RTN4RQ9BZR6 473 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 NOX4Q9NPH5 578 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 GRHPRQ9UBQ7 328 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 IGKV1D-42A0A075B6H8 117 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 METTL12A8MUP2 240 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ARL6IP5O75915 188 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TFPIP10646 304 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 RORAP35398 523 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 DIO1P49895 249 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 HNRNPKP61978 463 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TDGQ13569 410 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 TOMM34Q15785 309 aaPredicted RBP10.54□□□□□ -0.72
PTPN2-201ENST00000309660 ARHGAP40Q5TG30 622 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 OR6N2Q8NGY6 317 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 SLC2A12Q8TD20 617 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 OR2B2Q9GZK3 357 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 RXFP3Q9NSD7 469 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 NUDT15Q9NV35 164 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 KLHL21Q9UJP4 597 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 RNF215Q9Y6U7 377 aa10.54□□□□□ -0.72
PTPN2-201ENST00000309660 DCTN6O00399 190 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 ARHGEF9O43307 516 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 SRFP11831 508 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 THBS2P35442 1172 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 SLC37A1P57057 533 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 SNRPD2P62316 118 aaKnown RBP10.53□□□□□ -0.72
PTPN2-201ENST00000309660 KLHL26Q53HC5 615 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 LINC00114Q6XXX2 140 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 C16orf47Q6ZP98 133 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-201ENST00000309660 POMGNT2Q8NAT1 580 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 TBL1XR1Q9BZK7 514 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 THADAQ6YHU6 1953 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 RAD1O60671 282 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 SERPINA3P01011 423 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 PRPS1P60891 318 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 DGCR2P98153 550 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 TRAM1Q15629 374 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 NTRK2Q16620 822 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 LGALS14Q8TCE9 139 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 THEM6Q8WUY1 208 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms