RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ETV1P50549 477 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM205Q6UW68 189 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 RASD2Q96D21 266 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2A5Q96R48 311 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ELF4Q99607 663 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 POLHQ9Y253 713 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2AT4A6NND4 320 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 A8MVM7 634 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF593O00488 134 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 DPM1O60762 260 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 MTRF1O75570 445 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CD3GP09693 182 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 SBK2P0C263 348 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CLEC2LP0C7M8 214 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 GLB1P16278 677 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 KIR2DL1P43626 348 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CSRP3P50461 194 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 RIPPLY1Q0D2K3 151 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 AWAT2Q6E213 333 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 PAQR6Q6TCH4 344 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 TIGD4Q8IY51 512 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF587Q96SQ5 575 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM246Q9BRR3 403 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF701Q9NV72 531 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 NUFIP1Q9UHK0 495 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CACNG2Q9Y698 323 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 TOXO94900 526 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CTBP2P56545 445 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 FZD2Q14332 565 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 HBMQ6B0K9 141 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 STT3BQ8TCJ2 826 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF160Q9HCG1 818 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CMC2Q9NRP2 79 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 NOX1Q9Y5S8 564 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 IDSB3KWA1 339 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 P2RX6O15547 441 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 RPS19P39019 145 aaKnown RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MAN2A2P49641 1150 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 FAM69AQ5T7M9 428 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 VN1R4Q7Z5H5 301 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 NEDD4LQ96PU5 975 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2B2Q9GZK3 357 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 RANBP3Q9H6Z4 567 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SIAEQ9HAT2 523 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 PLEK2Q9NYT0 353 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MYEF2Q9P2K5 600 aaKnown RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MGAT4CQ9UBM8 478 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 FBXO9Q9UK97 447 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 PTPRFP10586 1907 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 RLFQ13129 1914 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MYO16Q9Y6X6 1858 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 CIB4A0PJX0 185 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2W5A6NFC9 320 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 ACOT7O00154 380 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC2A10O95528 541 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MTNR1BP49286 362 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 STEAP3Q658P3 488 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 METAP1DQ6UB28 335 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPBAR1Q8TDU6 330 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPTSSAQ969W0 71 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC25A44Q96H78 314 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC25A19Q9HC21 320 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 A4GNTQ9UNA3 340 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 PRKNO60260 465 aaPredicted RBP10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 ICAM2P13598 275 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 FGL2Q14314 439 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 P2RY14Q15391 338 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 PCGF3Q3KNV8 242 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 CHRFAM7AQ494W8 412 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MTFR2Q6P444 385 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR5J2Q8NH18 312 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 MNTQ99583 582 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC6A7Q99884 636 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 RNF167Q9H6Y7 350 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 NPFFR2Q9Y5X5 522 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 LCTP09848 1927 aa10.51□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC2A5P22732 501 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 PTH2RP49190 550 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARHGDIBP52566 201 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 EIF5AP63241 154 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 MRPS10P82664 201 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GRINAQ7Z429 371 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 NRARPQ7Z6K4 114 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 LACC1Q8IV20 430 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 FOXRED2Q8IWF2 684 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPR32P1Q8NGA4 272 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 WDR76Q9H967 626 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 LCATP04180 440 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 AMY2AP04746 511 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 ERP29P30040 261 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 HERV-K104P61576 105 aa10.5□□□□□ -0.73
PCDHGC3-201ENST00000308177 EEF1A1P68104 462 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms