RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 JSRP1Q96MG2 331 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF582Q96NG8 517 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SLC38A2Q96QD8 506 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 RBM38Q9H0Z9 239 aaKnown RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 FKRPQ9H9S5 495 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HINT3Q9NQE9 182 aaKnown RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NANSQ9NR45 359 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SACM1LQ9NTJ5 587 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SCN3BQ9NY72 215 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GPR83Q9NYM4 423 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PLA2G3Q9NZ20 509 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF229Q9UJW7 825 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ADAM18Q9Y3Q7 739 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SMG1Q96Q15 3661 aaKnown RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PINLYPA6NC86 204 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 A6NL46 340 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 COL6A6A6NMZ7 2263 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 KDM4EB2RXH2 506 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 B8ZZF3 427 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 FTCDNL1E5RQL4 147 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 BLOC1S5-TXNDC5H3BN57 136 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 H3BSA7 217 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HMGN1P05114 100 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NF1P21359 2839 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SHC1P29353 583 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 SLC6A6P31641 620 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 MAP2K4P45985 399 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NR1H2P55055 460 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 CSNK2BP67870 215 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF91Q05481 1191 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 RPL18Q07020 188 aaKnown RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PMS2P3Q13401 168 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 FAM69AQ5T7M9 428 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 AADACL4Q5VUY2 407 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TIGD3Q6B0B8 471 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 LINC00696Q6ZRV3 163 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 IPCEF1Q8WWN9 437 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 THAP4Q8WY91 577 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 GPX7Q96SL4 187 aaPredicted RBP6.28□□□□□ -1.4
PTCD2-201ENST00000308077 COPS4Q9BT78 406 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TAPBPLQ9BX59 468 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HCAR1Q9BXC0 346 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PRRG3Q9BZD7 231 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 YIPF3Q9GZM5 350 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 PTGES2Q9H7Z7 377 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 MED20Q9H944 212 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 NRIP3Q9NQ35 241 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 CMC2Q9NRP2 79 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 CELSR3Q9NYQ7 3312 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 LRFN1Q9P244 771 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 TEKT2Q9UIF3 430 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 IER3IP1Q9Y5U9 82 aa6.28□□□□□ -1.4
PTCD2-201ENST00000308077 FREM3P0C091 2139 aa6.27□□□□□ -1.4
PTCD2-201ENST00000308077 FAM183AA6NL82 134 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 H3BML4 177 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 EFSO43281 561 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF208O43345 1280 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RGS10O43665 173 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TLX3O43711 291 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZIC3O60481 467 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SNX4O95219 450 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 OPN1LWP04000 364 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CDK1P06493 297 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 STSP08842 583 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DBTP11182 482 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 IMPDH2P12268 514 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PEPDP12955 493 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 HK1P19367 917 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DPP4P27487 766 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 GRPRP30550 384 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DSCR4P56555 118 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SOX8P57073 446 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PRPS1P60891 318 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ERVK-25P63136 954 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CDC20Q12834 499 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 OR1C1Q15619 314 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 NEDD8Q15843 81 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TMEM44Q2T9K0 475 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CNPY1Q3B7I2 92 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 MEDAGQ5VYS4 303 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SLC6A19Q695T7 634 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 DPY19L2P2Q6ZN68 376 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PRSS48Q7RTY5 328 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 NANOGNBQ7Z5D8 188 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CPOQ8IVL8 374 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SLC43A2Q8N370 569 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ATP6V1C2Q8NEY4 427 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ANKK1Q8NFD2 765 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 SLC25A36Q96CQ1 311 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 PLEKHA8Q96JA3 519 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ERMAPQ96PL5 475 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 UTP23Q9BRU9 249 aaKnown RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CCDC90BQ9GZT6 254 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 CXorf56Q9H5V9 222 aa6.27□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF552Q9H707 407 aaPredicted RBP6.27□□□□□ -1.41
PTCD2-201ENST00000308077 TMEM185BQ9H7F4 350 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms