RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CYB5R2Q6BCY4 276 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 LIN54Q6MZP7 749 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 MED27Q6P2C8 311 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 C1orf216Q8TAB5 229 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 TMEM255BQ8WV15 326 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 COL4A3Q01955 1670 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 A0A1B0GUH1 482 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 MEX3AA1L020 520 aaKnown RBP14.92□□□□□ -0.02
CCDC8-201ENST00000307522 CDHR4A6H8M9 788 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 COL9A1P20849 921 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 TRHRP34981 398 aaPredicted RBP14.92□□□□□ -0.02
CCDC8-201ENST00000307522 IRF4Q15306 451 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 C1orf94Q6P1W5 598 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 VRK2Q86Y07 508 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 ZDHHC5Q9C0B5 715 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 TRIM36Q9NQ86 728 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 TAS2R10Q9NYW0 307 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 LOC100509620A0A075B734 347 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 TMEM272A0A1B0GTI8 110 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 A0A1W2PS29 197 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 PRG2P13727 222 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 CSRP2Q16527 193 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 GRHL2Q6ISB3 625 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 ZSCAN1Q8NBB4 408 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 DNAAF1Q8NEP3 725 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 OR6S1Q8NH40 331 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 RHOVQ96L33 236 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 ZNF559Q9BR84 538 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 PTDSS2Q9BVG9 487 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 ATXN7L1Q9ULK2 861 aaPredicted RBP14.92□□□□□ -0.02
CCDC8-201ENST00000307522 DYRK1BQ9Y463 629 aa14.92□□□□□ -0.02
CCDC8-201ENST00000307522 A0A1W2PRQ8 180 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 EFCAB7A8K855 629 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 C1QTNF3-AMACRE9PGA6 284 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 C8orf89P0DMQ9 161 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 LAMP2P13473 410 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 CNR1P21554 472 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 GRPRP30550 384 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ANXA11P50995 505 aaKnown RBP14.91□□□□□ -0.02
CCDC8-201ENST00000307522 SGCGQ13326 291 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 LASP1Q14847 261 aaKnown RBP14.91□□□□□ -0.02
CCDC8-201ENST00000307522 AGBL4Q5VU57 503 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 OR2W3Q7Z3T1 314 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ZNF546Q86UE3 836 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 TMEM17Q86X19 198 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 RFKQ969G6 155 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ZNF607Q96SK3 696 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 MED9Q9NWA0 146 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 EMC3Q9P0I2 261 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ZMIZ1Q9ULJ6 1067 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 AGPAT2O15120 278 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 YKT6O15498 198 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 FADS1O60427 444 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 LILRB5O75023 590 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 KLF8O95600 359 aaPredicted RBP14.91□□□□□ -0.02
CCDC8-201ENST00000307522 APODP05090 189 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 S100A6P06703 90 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 UQCRC2P22695 453 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ADH6P28332 368 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 PITPNAQ00169 270 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
CCDC8-201ENST00000307522 AVPI1Q5T686 147 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ZNF626Q68DY1 528 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 FAM129CQ86XR2 697 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 IL17RCQ8NAC3 791 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 PATE1Q8WXA2 126 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 PDCD10Q9BUL8 212 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 CHRDQ9H2X0 955 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 SLC27A6Q9Y2P4 619 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ATG4BQ9Y4P1 393 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 ARHGEF17Q96PE2 2063 aaPredicted RBP14.91□□□□□ -0.02
CCDC8-201ENST00000307522 FREM2Q5SZK8 3169 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 LRRK1Q38SD2 2015 aa14.91□□□□□ -0.02
CCDC8-201ENST00000307522 FAM25EA8MYX2 175 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 IDSB3KWA1 339 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 EML2O95834 649 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 FAM71E1Q6IPT2 247 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 SLCO4C1Q6ZQN7 724 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 OR9A1PQ8NGU1 263 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 GOT1L1Q8NHS2 421 aaPredicted RBP14.9□□□□□ -0.02
CCDC8-201ENST00000307522 SLC25A38Q96DW6 304 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 C16orf58Q96GQ5 468 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 ISYNA1Q9NPH2 558 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 MSRAQ9UJ68 235 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 GNB5O14775 395 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 FLRT2O43155 660 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 OR1F1O43749 312 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 ACTL6AO96019 429 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 NAA10P41227 235 aaPredicted RBP14.9□□□□□ -0.02
CCDC8-201ENST00000307522 PTH2RP49190 550 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 GUCA2AQ02747 115 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 SMCO1Q147U7 214 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 TRAM2Q15035 370 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 TAF13Q15543 124 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 ODF4Q2M2E3 257 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 TMEM196Q5HYL7 178 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 NAA40Q86UY6 237 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 TBC1D19Q8N5T2 526 aa14.9□□□□□ -0.02
CCDC8-201ENST00000307522 RLN3Q8WXF3 142 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms