RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TMEM239Q8WW34 195 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 HIST1H2ACQ93077 130 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 POP5Q969H6 163 aaKnown RBP9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TAAR8Q969N4 342 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ASB9Q96DX5 294 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PYURFQ96I23 114 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ZNF587Q96SQ5 575 aaPredicted RBP9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 BTBD10Q9BSF8 475 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PLSCR4Q9NRQ2 329 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ELOVL5Q9NYP7 299 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 A4GNTQ9UNA3 340 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MED31Q9Y3C7 131 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ENPP4Q9Y6X5 453 aa9.78□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ENO4A6NNW6 628 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF716A6NP11 495 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF814B7Z6K7 855 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FTCDNL1E5RQL4 147 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 J3KTA2 159 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 hCG_2039718K7EN88 272 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RAMP1O60894 148 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 DNAJC8O75937 253 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR6A2O95222 327 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CGAP01215 116 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 BGLAPP02818 100 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MT-ND1P03886 318 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 THY1P04216 161 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FABP3P05413 133 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF43P17038 809 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RHCEP18577 417 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ATP6V1B2P21281 511 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CD79BP40259 229 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 BNIP1Q12981 228 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PMS2P3Q13401 168 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 C1DQ13901 141 aaKnown RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SLC17A1Q14916 467 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 POU4F3Q15319 338 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 HIST2H2BCQ6DN03 193 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LCN8Q6JVE9 175 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LINC00114Q6XXX2 140 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 H1FNTQ75WM6 255 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TSPYL5Q86VY4 417 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NKAIN4Q8IVV8 208 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 UBE2J2Q8N2K1 259 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SCAIQ8N9R8 606 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ADPRHL1Q8NDY3 354 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR5J2Q8NH18 312 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TMEM255BQ8WV15 326 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 APH1AQ96BI3 265 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF426Q9BUY5 554 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ENKD1Q9H0I2 346 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KRCC1Q9NPI7 259 aaPredicted RBP9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NANSQ9NR45 359 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PARPBPQ9NWS1 579 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 B3GALT5Q9Y2C3 310 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FLVCR1Q9Y5Y0 555 aa9.77□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LRRK2Q5S007 2527 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TUBAL3A6NHL2 446 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LYPD3O95274 346 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CH25HO95992 272 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 H1F0P07305 194 aaKnown RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KIR2DL3P43628 341 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR3A2P47893 321 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 UGT2B15P54855 530 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SMIM11AP58511 58 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CBX1P83916 185 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SPIBQ01892 262 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PUDPQ08623 228 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF74Q16587 644 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FGD3Q5JSP0 725 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF474Q6S9Z5 364 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF730Q6ZMV8 503 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 AAED1Q7RTV5 226 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NANOGNBQ7Z5D8 188 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 UEVLDQ8IX04 471 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 DMRTC2Q8IXT2 367 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CDK20Q8IZL9 346 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FAM86B1Q8N7N1 296 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PFN4Q8NHR9 129 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SLC7A6OSQ96CW6 309 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SGTBQ96EQ0 304 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CLPTM1LQ96KA5 538 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OXGR1Q96P68 337 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MOGAT1Q96PD6 335 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PRSS27Q9BQR3 290 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MRPL39Q9NYK5 338 aaKnown RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 UPB1Q9UBR1 384 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NDRG3Q9UGV2 375 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms