RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ANAPC10Q9UM13 185 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CLCA2Q9UQC9 943 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 KMT2EQ8IZD2 1858 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PCDH15Q96QU1 1955 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 C5orf58C9J3I9 102 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 F8VVB4 439 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 F8VWA3 439 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 H3BUI4 141 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 TGFBR3LH3BV60 316 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ITGA10O75578 1167 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 RLN2P04090 185 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 FAM157CP0CG43 387 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 LYL1P12980 280 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 F8A1P23610 371 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 MAPK3P27361 379 aaPredicted RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 GRM7Q14831 915 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 TOMM20Q15388 145 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ACSM3Q53FZ2 586 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 TRIQKQ629K1 86 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PLBD1Q6P4A8 553 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 FDX2Q6P4F2 183 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 DGAT2L6Q6ZPD8 337 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 GRASPQ7Z6J2 395 aaPredicted RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 WDFY1Q8IWB7 410 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ZNF595Q8IYB9 648 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ZNF619Q8N2I2 560 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SLC16A11Q8NCK7 471 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 OR4E2Q8NGC2 313 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 OR52B4Q8NGK2 314 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PIGXQ8TBF5 258 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 LGALS14Q8TCE9 139 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PMEPA1Q969W9 287 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SLC22A18Q96BI1 424 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 MYADMQ96S97 322 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SDF2Q99470 211 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 MRI1Q9BV20 369 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 MED28Q9H204 178 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 RNF122Q9H9V4 155 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CYTL1Q9NRR1 136 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 POT1Q9NUX5 634 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 KLHL9Q9P2J3 617 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SLC7A7Q9UM01 511 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 GSTK1Q9Y2Q3 226 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CPSF4LA6NMK7 179 aaKnown RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 IFITM5A6NNB3 132 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 H7BY64 318 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 I3L521 148 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ARPC3O15145 178 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CH25HO95992 272 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ALDOBP05062 364 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 IGFBP3P17936 291 aaPredicted RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 IL32P24001 234 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 GJA4P35212 333 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 GABRA4P48169 554 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 NCBP2P52298 156 aaKnown RBP eCLIP4.97□□□□□ -1.612e-7■■■■□ 26.1
VPS50-202ENST00000305866 RPL6Q02878 288 aaKnown RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 IL15RAQ13261 267 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 BIKQ13323 160 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 FAM53BQ14153 422 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 MPPED2Q15777 294 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CLEC12AQ5QGZ9 265 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ZNF813Q6ZN06 617 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 C16orf62Q7Z3J2 963 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 C17orf82Q86X59 251 aaPredicted RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 ACBD7Q8N6N7 88 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 C7orf57Q8NEG2 295 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 NUP43Q8NFH3 380 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 GPBAR1Q8TDU6 330 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 NSMAFQ92636 917 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PRAP1Q96NZ9 151 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CACNG6Q9BXT2 260 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 CHST6Q9GZX3 395 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 DNTTIP1Q9H147 329 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 ALX4Q9H161 411 aaPredicted RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 S1PR5Q9H228 398 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PURGQ9UJV8 347 aaKnown RBP4.97□□□□□ -1.61
VPS50-202ENST00000305866 DAPP1Q9UN19 280 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 PLEKHA6Q9Y2H5 1048 aa4.97□□□□□ -1.61
VPS50-202ENST00000305866 TBC1D3EA0A087X179 549 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 TRBV6-7A0A0A0MS04 114 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 A0A1W2PQF6 199 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 MEX3AA1L020 520 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 FITM1A5D6W6 292 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 TRAPPC13A5PLN9 417 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 H3BMH7 237 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ARHGEF9O43307 516 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 GLSO94925 669 aaPredicted RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 SLC35G4P0C7Q5 338 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 NDUFV2P19404 249 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 PSMB1P20618 241 aaKnown RBP4.96□□□□□ -1.61
VPS50-202ENST00000305866 DNASE1P24855 282 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 DCTDP32321 178 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 ACSL1P33121 698 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 EFNB2P52799 333 aa4.96□□□□□ -1.61
VPS50-202ENST00000305866 YPEL5P62699 121 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms