RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 ETHE1O95571 254 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZSCAN5DPP0CG00 497 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SMIM10L1P0DMW3 83 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CPMP14384 443 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 APEX1P27695 318 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 NR4A2P43354 598 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PRKCDQ05655 676 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ITGADQ13349 1161 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZNF672Q499Z4 452 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ATP6AP1LQ52LC2 224 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CCDC116Q8IYX3 515 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 GALNT4Q8N4A0 578 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 C2CD4AQ8NCU7 369 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZNF563Q8TA94 476 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 MUL1Q969V5 352 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 MRPL24Q96A35 216 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PPCDCQ96CD2 204 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SMIM10Q96HG1 83 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SLC19A3Q9BZV2 496 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 GHITMQ9H3K2 345 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SH2D2AQ9NP31 389 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KRCC1Q9NPI7 259 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SEMA4BQ9NPR2 832 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KLHL21Q9UJP4 597 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 USF3Q68DE3 2245 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PHF3Q92576 2039 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 A0A0G2JMM0 328 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 A0A1W2PPB8 328 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 A0A1W2PRS3 328 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KIR3DP1A8MWS1 328 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 H0YAE9 185 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 STX16-NPEPL1H3BU86 382 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 M0QZ24 198 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CCRL2O00421 344 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ATP6V1B1P15313 513 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZNF708P17019 499 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 STARP49675 285 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PKNOX1P55347 436 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PRPS1P60891 318 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FADDQ13158 208 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 LINC01559Q495D7 138 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 NCMAPQ5T1S8 102 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 GALNT18Q6P9A2 607 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 UNQ6126/PRO20091Q6UXV3 157 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 C17orf107Q6ZR85 190 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 OVCH2Q7RTZ1 564 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 MEX3DQ86XN8 651 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SLC44A2Q8IWA5 706 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PYDC1Q8WXC3 89 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PIK3R3Q92569 461 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KAT2AQ92830 837 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CCDC124Q96CT7 223 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KLHL15Q96M94 604 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ADOQ96SZ5 270 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 G6PC3Q9BUM1 346 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SPATA5L1Q9BVQ7 753 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 GLTPQ9NZD2 209 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CHCHD2Q9Y6H1 151 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ELOA3DA6NLF2 546 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 DUXAA6NLW8 204 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FAM157AC9JC47 383 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 HCRTR2O43614 444 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 TGM6O95932 706 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 YES1P07947 543 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 RFPL3SP0C7P2 107 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZNF17P17021 662 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 RAB3AP20336 220 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 HSPA7P48741 367 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 RNF144AP50876 292 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 MANFP55145 182 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 POU6F2P78424 691 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 SLC3A1Q07837 685 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ELOA3BQ3SY89 546 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FAM120AOSQ5T036 256 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 GRHL2Q6ISB3 625 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 DENND6AQ8IWF6 608 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ELOA3Q8NG57 546 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 OR4F15Q8NGB8 312 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 DYNC2LI1Q8TCX1 351 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 STARD4Q96DR4 205 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FBXO17Q96EF6 278 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 CCDC88CQ9P219 2028 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 NUP210LQ5VU65 1888 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.23□□□□□ -1.572e-13■■■■□ 21.7
ZNF440-201ENST00000304060 MYOCOSA0A1B0GUC4 107 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 MPTX1A8MV57 137 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 B4DSR2 109 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FGF17O60258 216 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 NRP2O60462 931 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 TFP02787 698 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 HIST1H2ABP04908 130 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ENO1P06733 434 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KITP10721 976 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 HLA-DMAP28067 261 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ABCD3P28288 659 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 APOBEC3AP31941 199 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FEN1P39748 380 aaKnown RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
ZNF440-201ENST00000304060 ZNF273Q14593 569 aa5.23□□□□□ -1.57
ZNF440-201ENST00000304060 FAM209BQ5JX69 171 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms