RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RNF165Q6ZSG1 346 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 Q7L0L9 218 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 ZNF765Q7L2R6 523 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 ZNF101Q8IZC7 436 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 SLC25A19Q9HC21 320 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 ADAM29Q9UKF5 820 aa12.96□□□□□ -0.33
SDC2-201ENST00000302190 RHPN2P1A8MT19 583 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.34
SDC2-201ENST00000302190 PAPLNO95428 1278 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 TRAPPC2P0DI81 140 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 TRAPPC2BP0DI82 140 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 MAOAP21397 527 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 PSMA3P25788 255 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 OR1D4P47884 311 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 EEF1A2Q05639 463 aaKnown RBP12.96□□□□□ -0.34
SDC2-201ENST00000302190 DMRTC1Q5HYR2 192 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 ZNF550Q7Z398 422 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 TRPV4Q9HBA0 871 aa12.96□□□□□ -0.34
SDC2-201ENST00000302190 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 SEMG1P04279 462 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CEACAM5P06731 702 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 RNH1P13489 461 aaKnown RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 ART1P52961 327 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 METAP1DQ6UB28 335 aaPredicted RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 PARM1Q6UWI2 310 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 NDUFAF7Q7L592 441 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 OR5AK2Q8NH90 309 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CREB3L1Q96BA8 519 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 BTBD2Q9BX70 525 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 SLC23A1Q9UHI7 598 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 MRPS2Q9Y399 296 aaKnown RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 ASXL3Q9C0F0 2248 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 A0A0A6YYD5 115 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 LANCL1O43813 399 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 GIMD1P0DJR0 217 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ANXA7P20073 488 aaKnown RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 HLA-DMAP28067 261 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 PRKAR1BP31321 381 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CDK5Q00535 292 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 DPTQ07507 201 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ALG10Q5BKT4 473 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 PRAMEF17Q5VTA0 474 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 NIPAL3Q6P499 406 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CFAP77Q6ZQR2 320 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 MFSD9Q8NBP5 474 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ZBTB44Q8NCP5 570 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 NR4A3Q92570 626 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 NOX3Q9HBY0 568 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 FANCFQ9NPI8 374 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 MED11Q9P086 117 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 KLHL9Q9P2J3 617 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 DAPP1Q9UN19 280 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 APBB3O95704 486 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 IGFALSP35858 605 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 OR4D9Q8NGE8 314 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 SFXN5Q8TD22 340 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 NXPE2Q96DL1 559 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ABHD1Q96SE0 405 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ZNF471Q9BX82 626 aaPredicted RBP12.95□□□□□ -0.34
SDC2-201ENST00000302190 MAFFQ9ULX9 164 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 ASB4Q9Y574 426 aa12.95□□□□□ -0.34
SDC2-201ENST00000302190 A0A1B0GVI7 797 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SYT5O00445 386 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 POU3F3P20264 500 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 ACTA2P62736 377 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 ACTG2P63267 376 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 HYAL1Q12794 435 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 ARHGAP40Q5TG30 622 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 OR7E24Q6IFN5 339 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 PIGUQ9H490 435 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 NIPAL2Q9H841 368 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 NCOR1O75376 2440 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 TOR1AO14656 332 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SLC43A1O75387 559 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SLC22A5O76082 557 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 EML2O95834 649 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 CISD3P0C7P0 127 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 TMEM52BQ4KMG9 183 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 OR52N1Q8NH53 320 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 S100A13Q99584 98 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 LIN7BQ9HAP6 207 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 LRIT1Q9P2V4 623 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 C2orf72A6NCS6 295 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 OR5K3A6NET4 321 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 GOSR2O14653 212 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 CTSVO60911 334 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms