RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MYADMQ96S97 322 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF629Q9UEG4 869 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 SPO11Q9Y5K1 396 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 KCNK5O95279 499 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 MT-ND4LP03901 98 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 SPI1P17947 270 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 FKBP1BP68106 108 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 GPR176Q14439 515 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 RNLSQ5VYX0 342 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 TSACCQ96A04 125 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 CHRDQ9H2X0 955 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 PRELID3BQ9Y3B1 194 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF888P0CJ79 500 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 RING1Q06587 406 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 PMPCAQ10713 525 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 GUK1Q16774 197 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ANKRD9Q96BM1 317 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 LRFN5Q96NI6 719 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 DHRS4Q9BTZ2 278 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ARV1Q9H2C2 271 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 TAF9BQ9HBM6 251 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 DNAJB11Q9UBS4 358 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 CYB5R1Q9UHQ9 305 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 FBXL4Q9UKA2 621 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 DUOX1Q9NRD9 1551 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 TRIM77I1YAP6 450 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 UGDHO60701 494 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 CBX7O95931 251 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ANXA7P20073 488 aaKnown RBP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 MTNR1BP49286 362 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 RAB11AP62491 216 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 SLC7A9P82251 487 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 NOGQ13253 232 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 MELKQ14680 651 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF542PQ5EBM4 170 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 RANBP10Q6VN20 620 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 KHSRPQ92945 711 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCN3B-201ENST00000299333 PIGQQ9BRB3 760 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 TM7SF3Q9NS93 570 aa13.85□□□□□ -0.19
SCN3B-201ENST00000299333 IAH1Q2TAA2 248 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 MOB3CQ70IA8 216 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 RETREG3Q86VR2 466 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 OR5AR1Q8NGP9 310 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ALOXE3Q9BYJ1 711 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 LIN7BQ9HAP6 207 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF337Q9Y3M9 751 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 WIF1Q9Y5W5 379 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 UBL4AP11441 157 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 HTR2CP28335 458 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 LIPAP38571 399 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 P2RX1P51575 399 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 HBG1P69891 147 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 HBG2P69892 147 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SLC17A1Q14916 467 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 CCNJQ5T5M9 372 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ABHD4Q8TB40 342 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 NEIL2Q969S2 332 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SLC41A2Q96JW4 573 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 EGLN2Q96KS0 407 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SERINC2Q96SA4 455 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 C20orf27Q9GZN8 174 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TOLLIPQ9H0E2 274 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 HHATLQ9HCP6 504 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SPHK2Q9NRA0 654 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 PPP5D1E7EU14 171 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 CCSO14618 274 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 RNGTTO60942 597 aaKnown RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TRAPPC2P0DI81 140 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TRAPPC2BP0DI82 140 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 OR1Q1Q15612 314 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SYPL1Q16563 259 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 KCTD11Q693B1 232 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 TMEM151BQ8IW70 566 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 APCDD1Q8J025 514 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 NANOS1Q8WY41 292 aaKnown RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 NTMT1Q9BV86 223 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 PRO1933Q9H354 126 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ANKRD19PQ9H560 264 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 SLCO3A1Q9UIG8 710 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF443Q9Y2A4 671 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 PMP2P02689 132 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 NFYBP25208 207 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 APLNRP35414 380 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 PSMB3P49720 205 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 GPM6BQ13491 265 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 ZNF266Q14584 549 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 DPPA4Q7L190 304 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 RAB7BQ96AH8 199 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
SCN3B-201ENST00000299333 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
SCN3B-201ENST00000299333 POFUT1Q9H488 388 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms