RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DIP2CQ9Y2E4 1556 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CLDN20P56880 219 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TRA2BP62995 288 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CXADRP78310 365 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MRPS34P82930 218 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ILKQ13418 452 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LTB4RQ15722 352 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GLYATL3Q5SZD4 288 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CARD17Q5XLA6 110 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 BTNL3Q6UXE8 466 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MTFMTQ96DP5 389 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NKX3-1Q99801 234 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF256Q9Y2P7 627 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 QDPRP09417 244 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FKBP1AP62942 108 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SELENOWP63302 87 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MEF2AQ02078 507 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR5I1Q13606 314 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GBX1Q14549 363 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 EEF1DP3Q658K8 133 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR51Q1Q8NH59 317 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SIX2Q9NPC8 291 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR52A1Q9UKL2 312 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 KLRC4O43908 158 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SUSD5O60279 629 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MSCO60682 206 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ADH1BP00325 375 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 H2BFMP0C1H6 154 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RPL29P47914 159 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 STC1P52823 247 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 VRK2Q86Y07 508 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ARRDC4Q8NCT1 418 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR52N1Q8NH53 320 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DYRK2Q92630 601 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RBM14Q96PK6 669 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TAS2R5Q9NYW4 299 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 KIR2DS1A0A191URI9 304 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 RNASET2O00584 256 aaKnown RBP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PAGE1O75459 146 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 SERPINA2P20848 420 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 KIR2DS4P43632 304 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 KIR2DS1Q14954 304 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 CLEC12BQ2HXU8 276 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 FBXW12Q6X9E4 464 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 FAM151AQ8WW52 585 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OPALINQ96PE5 141 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 SYT17Q9BSW7 474 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM43Q9BTV4 400 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 MANBALQ9NQG1 85 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OLAHQ9NV23 265 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 ZDHHC3Q9NYG2 299 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 MOKQ9UQ07 419 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TRAV36DV7A0A075B6V5 113 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 MYOCOSA0A1B0GUC4 107 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 RFPL4AA6NLU0 287 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 RFPL4AL1F8VTS6 287 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 DEGS1O15121 323 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 HRO43593 1189 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 DDAH2O95865 285 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 DRD5P21918 477 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 APOFQ13790 326 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TMIGD1Q6UXZ0 262 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM130Q8N3G9 435 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 FAM156AQ8NDB6 213 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OR6K3Q8NGY3 331 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 NTNG2Q96CW9 530 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 LMF2Q9BU23 707 aaKnown RBP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TM7SF3Q9NS93 570 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 KIAA1551Q9HCM1 1747 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OR8U8P0C7N1 319 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 GLB1P16278 677 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 KCNJ10P78508 379 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PMVKQ15126 192 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 SF3B4Q15427 424 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 LETMD1Q6P1Q0 360 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OR10P1Q8NGE3 313 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OR4K15Q8NH41 348 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 ZNRF4Q8WWF5 429 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 KCNJ15Q99712 375 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 CREBZFQ9NS37 354 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 TLN2Q9Y4G6 2542 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 C2CD4BA6NLJ0 364 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 CHEK1O14757 476 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PGA4P0DJD7 388 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PGA5P0DJD9 388 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 HAAOP46952 286 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 NOXRED1Q6NXP6 359 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 FAM196AQ6ZSG2 479 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 NAXEQ8NCW5 288 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 OR4B1Q8NGF8 309 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 UTS2RQ9UKP6 389 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 GPR31O00270 319 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 PMP2P02689 132 aa4.53□□□□□ -1.68
CSMD3-201ENST00000297405 F7P08709 466 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-201ENST00000297405 AMD1P17707 334 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms