RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ULBP3Q9BZM4 244 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 STRADBQ9C0K7 418 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ISG20L2Q9H9L3 353 aaKnown RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 SMURF1Q9HCE7 757 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 KLHL1Q9NR64 748 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 FBXL4Q9UKA2 621 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 LOXL2Q9Y4K0 774 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 NPFFR2Q9Y5X5 522 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 PCSK5Q92824 1860 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 MAGEB3O15480 346 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 SCO2O43819 266 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ZNF354AO60765 605 aaPredicted RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 GALP22466 123 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 TGM1P22735 817 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 AQP2P41181 271 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 P2RX1P51575 399 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ERVK-25P63136 954 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 CSRP2Q16527 193 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 GXYLT1Q4G148 440 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ALG10Q5BKT4 473 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 DCAF12Q5T6F0 453 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 NANOGNBQ7Z5D8 188 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 OR5L2Q8NGL0 311 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 OR2Y1Q8NGV0 311 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 B4GALNT2Q8NHY0 566 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 AP3S1Q92572 193 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 TAAR9Q96RI9 348 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 EDEM2Q9BV94 578 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 MROQ9BYG7 248 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 BARHL1Q9BZE3 327 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 B3GNT4Q9C0J1 378 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 PCDHGB6Q9Y5F9 930 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 NOX1Q9Y5S8 564 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 KIF26BQ2KJY2 2108 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 IGLV3-32A0A0A0MS00 114 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 IQCMA0A1B0GVH7 501 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ISPDA4D126 451 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 LOC110117498-PIK3R3F6TDL0 507 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 CTDSP2O14595 271 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 UPK1BO75841 260 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 IGHEP01854 428 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 CD14P08571 375 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ASAH2BP0C7U1 165 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 COX6A1P12074 109 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 APEHP13798 732 aaKnown RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 SDC2P34741 201 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ETV6P41212 452 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 EGR4Q05215 589 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 HNRNPA0Q13151 305 aaKnown RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 ZNF181Q2M3W8 571 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 TBC1D25Q3MII6 688 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 SLC35D3Q5M8T2 416 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 JAZF1Q86VZ6 243 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 SNX29P2Q8IUI4 249 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 MOSPD2Q8NHP6 518 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 M1APQ8TC57 530 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 TTC9Q92623 222 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 MOGAT1Q96PD6 335 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 NMNAT3Q96T66 252 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 CNN2Q99439 309 aaKnown RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 HDHD5Q9BXW7 423 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 KCNN2Q9H2S1 579 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 ABCB10Q9NRK6 738 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 AKAP7Q9P0M2 348 aaPredicted RBP8.31□□□□□ -1.08
PDPN-201ENST00000294489 ZNF229Q9UJW7 825 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 POLHQ9Y253 713 aa8.31□□□□□ -1.08
PDPN-201ENST00000294489 VPS13AQ96RL7 3174 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TRBV11-1A0A0K0K1C0 115 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 A0A1W2PNU3 283 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 ETV2O00321 342 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 GABRPO00591 440 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 CASKO14936 926 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 ZFAND5O76080 213 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 OR2T7P0C7T2 308 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 NAT2P11245 290 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 CD53P19397 219 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 CTXN1P60606 82 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 IFITM3Q01628 133 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TMEM81Q6P7N7 255 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 FAM199XQ6PEV8 388 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 POMZP3Q6PJE2 187 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 CCDC190Q86UF4 302 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 MARCH9Q86YJ5 346 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 GALNT6Q8NCL4 622 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 NPEPL1Q8NDH3 523 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 OR2T27Q8NH04 317 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TMCO6Q96DC7 493 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 ZMYND19Q96E35 227 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 KTI12Q96EK9 354 aaPredicted RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 MRPL48Q96GC5 212 aaKnown RBP8.3□□□□□ -1.08
PDPN-201ENST00000294489 KLHDC3Q9BQ90 382 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 FKRPQ9H9S5 495 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 FRYLO94915 3013 aa8.3□□□□□ -1.08
PDPN-201ENST00000294489 TEX13CA0A0J9YWL9 993 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 578.9 ms