RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 ACOXLQ9NUZ1 547 aa18.22■□□□□ 0.51
CXCL16-201ENST00000293778 RBFOX1Q9NWB1 397 aaKnown RBP18.22■□□□□ 0.51
CXCL16-201ENST00000293778 ABCA7Q8IZY2 2146 aa18.22■□□□□ 0.51
CXCL16-201ENST00000293778 TRBV2A0A0J9YWF9 115 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 HMX3A6NHT5 357 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 LYRM1O43325 122 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 ASAH2BP0C7U1 165 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 APEHP13798 732 aaKnown RBP18.21■□□□□ 0.51
CXCL16-201ENST00000293778 EDNRAP25101 427 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 TACR3P29371 465 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 CTXN1P60606 82 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 SLC25A35Q3KQZ1 300 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 ARHGAP40Q5TG30 622 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 LYPD4Q6UWN0 246 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 TRILQ7L0X0 811 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 FAM122BQ7Z309 247 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 PRSS58Q8IYP2 241 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 LSM14AQ8ND56 463 aaKnown RBP18.21■□□□□ 0.51
CXCL16-201ENST00000293778 ZC3HAV1LQ96H79 300 aaKnown RBP18.21■□□□□ 0.51
CXCL16-201ENST00000293778 SLC41A2Q96JW4 573 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 KCNJ15Q99712 375 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 NEK6Q9HC98 313 aa18.21■□□□□ 0.51
CXCL16-201ENST00000293778 MOV10Q9HCE1 1003 aaKnown RBP18.21■□□□□ 0.51
CXCL16-201ENST00000293778 RPRD1BQ9NQG5 326 aaKnown RBP18.21■□□□□ 0.51
CXCL16-201ENST00000293778 TRAV1-2A0A0B4J238 106 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 BCAT2O15382 392 aaPredicted RBP18.21■□□□□ 0.5
CXCL16-201ENST00000293778 MYF5P13349 255 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 GLB1P16278 677 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 LCN1P31025 176 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 SLC6A8P48029 635 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 AFF3P51826 1226 aaKnown RBP18.21■□□□□ 0.5
CXCL16-201ENST00000293778 ZNF117Q03924 483 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 HSF2Q03933 536 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 CCDC58Q4VC31 144 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 LINC01590Q5TEZ4 76 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 C1orf189Q5VU69 101 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 PLET1Q6UQ28 207 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 C9orf40Q8IXQ3 194 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 SLC25A45Q8N413 288 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 TRMT10AQ8TBZ6 339 aaKnown RBP18.21■□□□□ 0.5
CXCL16-201ENST00000293778 DAZLQ92904 295 aaKnown RBP18.21■□□□□ 0.5
CXCL16-201ENST00000293778 KTI12Q96EK9 354 aaPredicted RBP18.21■□□□□ 0.5
CXCL16-201ENST00000293778 ALG12Q9BV10 488 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 RTN4RQ9BZR6 473 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 NPFFR2Q9Y5X5 522 aa18.21■□□□□ 0.5
CXCL16-201ENST00000293778 A0A1W2PPK0 400 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 C4orf47A7E2U8 309 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 FAM171A2A8MVW0 826 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 AGRPO00253 132 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 GMFGO60234 142 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 ARL6IP5O75915 188 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 TRAPPC2P0DI81 140 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 TRAPPC2BP0DI82 140 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 NPR2P20594 1047 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 RBMS1P29558 406 aaKnown RBP18.2■□□□□ 0.5
CXCL16-201ENST00000293778 UQCRC1P31930 480 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 DDOSTP39656 456 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 NR0B1P51843 470 aaKnown RBP18.2■□□□□ 0.5
CXCL16-201ENST00000293778 LTBQ06643 244 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 SF3A2Q15428 464 aaKnown RBP18.2■□□□□ 0.5
CXCL16-201ENST00000293778 SIX5Q8N196 739 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 C7orf57Q8NEG2 295 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 DNASE2BQ8WZ79 361 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 LPAR4Q99677 370 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 DPYSL5Q9BPU6 564 aa18.2■□□□□ 0.5
CXCL16-201ENST00000293778 A0A1B0GVT2 93 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 HCRTR2O43614 444 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 CPNE3O75131 537 aaKnown RBP18.19■□□□□ 0.5
CXCL16-201ENST00000293778 PAHP00439 452 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 F13BP05160 661 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 CD1AP06126 327 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 PSKH1P11801 424 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 SDHAP31040 664 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 PSMB10P40306 273 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 SLC25A1P53007 311 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 GPLD1P80108 840 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 ZNF57Q68EA5 555 aaPredicted RBP18.19■□□□□ 0.5
CXCL16-201ENST00000293778 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 SCAIQ8N9R8 606 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 ST6GAL2Q96JF0 529 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 ADAM19Q9H013 955 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 HDHD2Q9H0R4 259 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 C12orf10Q9HB07 376 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 SEMA5BQ9P283 1151 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 WNT16Q9UBV4 365 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 COPS7AQ9UBW8 275 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 CEP192Q8TEP8 1941 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 A0A0B4J293 547 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 A0A1B0GX78 115 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 GATBO75879 557 aaKnown RBP18.19■□□□□ 0.5
CXCL16-201ENST00000293778 GRPRP30550 384 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 RPS11P62280 158 aaKnown RBP eCLIP18.19■□□□□ 0.5
CXCL16-201ENST00000293778 TBRG1Q3YBR2 411 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 NANOGNBQ7Z5D8 188 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 DUSP18Q8NEJ0 188 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 RNF31Q96EP0 1072 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 TSSK2Q96PF2 358 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 SMAD5Q99717 465 aaKnown RBP18.19■□□□□ 0.5
CXCL16-201ENST00000293778 WWTR1Q9GZV5 400 aa18.19■□□□□ 0.5
CXCL16-201ENST00000293778 RXFP3Q9NSD7 469 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms