RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RPE65Q16518 533 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SYT6Q5T7P8 510 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FAM72AQ5TYM5 149 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TXNRD3NBQ6F5E7 133 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FAM72DQ6L9T8 149 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FBXW12Q6X9E4 464 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 LIPIQ6XZB0 460 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NLRP8Q86W28 1048 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 RPS19BP1Q86WX3 136 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FAM72BQ86X60 149 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SLC22A24Q8N4F4 322 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SPEM1Q8N4L4 309 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FRMD1Q8N878 549 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR6M1Q8NGM8 313 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM163Q8TC26 289 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 M1APQ8TC57 530 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PLEKHO2Q8TD55 490 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NEIL2Q969S2 332 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CIDECQ96AQ7 238 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 AKR1E2Q96JD6 320 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 LMF1Q96S06 567 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MCOLN1Q9GZU1 580 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NXF5Q9H1B4 397 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GAREM1Q9H706 876 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MOB1AQ9H8S9 216 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ARMC1Q9NVT9 282 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 WRAP73Q9P2S5 460 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GIMAP2Q9UG22 337 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MYH6P13533 1939 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 F8W036 122 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TYROBPO43914 113 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CACNG3O60359 315 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ALOX12BO75342 701 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ELK1P19419 428 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ENPP1P22413 925 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CXCR4P61073 352 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PPP1CAP62136 330 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 UBE2G1P62253 170 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PPP1R8Q12972 351 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 KRBOX4Q5JUW0 171 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FAM162BQ5T6X4 162 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HENMT1Q5T8I9 393 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 DCAF12L1Q5VU92 463 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 BTNL3Q6UXE8 466 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF761Q86XN6 746 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 B3GNT7Q8NFL0 401 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 LIPHQ8WWY8 451 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ASB11Q8WXH4 323 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PTERQ96BW5 349 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ABHD6Q9BV23 337 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM9BQ9NQ34 198 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RNF150Q9ULK6 438 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 LOC285095A0A1B0GVY8 99 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 BOLA2-SMG1P6H3BVE0 249 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ST8SIA5O15466 376 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TOXO94900 526 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 HTR2CP28335 458 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CLDN6P56747 220 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RPS27AP62979 156 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 UBA52P62987 128 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ERVK-25P63136 954 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SPOCK1Q08629 439 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SELPLGQ14242 412 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF674Q2M3X9 581 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FAM78AQ5JUQ0 283 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CLLU1OSQ5K130 101 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 C6orf132Q5T0Z8 1188 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MOB1BQ7L9L4 216 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TCTE3Q8IZS6 198 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MVB12AQ96EY5 273 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CMTM3Q96MX0 182 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CNTNAP3BQ96NU0 1288 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PHF7Q9BWX1 381 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR51J1Q9H342 316 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NMNAT1Q9HAN9 279 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 THAP10Q9P2Z0 257 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 RHBDD3Q9Y3P4 386 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM265A0A087WTH1 108 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SERINC4A6NH21 518 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SHISA7A6NL88 538 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 NOTOA8MTQ0 251 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 LGI1O95970 557 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 TACR1P25103 407 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 AOAHP28039 575 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CXADRP78310 365 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SMAD4Q13485 552 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF648Q5T619 568 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR7E24Q6IFN5 339 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CNIH2Q6PI25 160 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 FAM57BQ71RH2 274 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ADGRE4PQ86SQ3 457 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF687Q8N1G0 1237 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 CYB561A3Q8NBI2 242 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 OR13C9Q8NGT0 318 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF480Q8WV37 535 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 SLC39A7Q92504 469 aa3.78□□□□□ -1.8
SCN3A-201ENST00000283254 PDLIM5Q96HC4 596 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms