RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 NUDT22Q9BRQ3 303 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SEMA4CQ9C0C4 833 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OSGIN2Q9Y236 505 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 Q9Y3F1 56 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM184BQ9Y519 407 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 WIF1Q9Y5W5 379 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 V9GYS6 101 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 EP300Q09472 2414 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 M0R3H8 397 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ACKR3P25106 362 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TAGLNQ01995 201 aaKnown RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 LMAN2Q12907 356 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SLC36A2Q495M3 483 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 C1orf198Q9H425 327 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 DMRT3Q9NQL9 472 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CAMK2AQ9UQM7 478 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 EMC9Q9Y3B6 208 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 RAB5AP20339 215 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 MRPL19P49406 292 aaKnown RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CASP7P55210 303 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 H3F3AP84243 136 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CDK5R2Q13319 367 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SYT13Q7L8C5 426 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 NMES1Q9C002 83 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 DMAC2Q9NW81 257 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TMEM59LQ9UK28 342 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 VDAC3Q9Y277 283 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ENTPD2Q9Y5L3 495 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OR5K3A6NET4 321 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TCAPO15273 167 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 AP1G1O43747 822 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OR2C1O95371 312 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SEMA4FO95754 770 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 TXNDC12O95881 172 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PSMB10P40306 273 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 MEPCEQ7L2J0 689 aaKnown RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 NKAIN3Q8N8D7 197 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 BOD1Q96IK1 185 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SLC16A6O15403 523 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 WDR5P61964 334 aaKnown RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 FUT2Q10981 343 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 KHDC1LQ5JSQ8 128 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 OR8J2Q8NGG1 315 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 LIPHQ8WWY8 451 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 PIGCQ92535 297 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 APH1AQ96BI3 265 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF443Q9Y2A4 671 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 NID2Q14112 1375 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 GALR3O60755 368 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 DCAF7P61962 342 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 MLLT11Q13015 90 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 VAMP3Q15836 100 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 C18orf63Q68DL7 685 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 BTNL8Q6UX41 500 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF551Q7Z340 670 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 LGALS14Q8TCE9 139 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 EGLN1Q9GZT9 426 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CXXC1Q9P0U4 656 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-201ENST00000282516 CSNK1G3Q9Y6M4 447 aa8.16□□□□□ -1.1
NIPBL-201ENST00000282516 ANKRD36CQ5JPF3 1778 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 C4orf47A7E2U8 309 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 TYROBPO43914 113 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SPP1P10451 314 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 POU3F1Q03052 451 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 RTL8BQ17RB0 113 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 UMODL1-AS1Q8N2C9 162 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 CPEB3Q8NE35 698 aaKnown RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 NRIP3Q9NQ35 241 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 USP36Q9P275 1121 aaKnown RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 ANKMY1Q9P2S6 941 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 OR6C68A6NDL8 312 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 OR5H6Q8NGV6 325 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 RTP3Q9BQQ7 232 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 RCE1Q9Y256 329 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 A0A0U1RQF3 1178 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SH2D7A6NKC9 451 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 COCHO43405 550 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 OR7C1O76099 320 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 BMI1P35226 326 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 TRA2BP62995 288 aaKnown RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 ARHGAP11BQ3KRB8 267 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 PLAC9Q5JTB6 97 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 ENTHD1Q8IYW4 607 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SLC24A4Q8NFF2 622 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SCAMP4Q969E2 229 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 SLC17A9Q9BYT1 436 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 HEYLQ9NQ87 328 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 DNMT3BQ9UBC3 853 aaKnown RBP8.15□□□□□ -1.1
NIPBL-201ENST00000282516 ENPP1P22413 925 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 PTAFRP25105 342 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 OR4D1Q15615 310 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 EMC10Q5UCC4 262 aa8.15□□□□□ -1.1
NIPBL-201ENST00000282516 NPSR1Q6W5P4 371 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms