RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SNX33Q8WV41 574 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 DIRAS2Q96HU8 199 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 ZMIZ1Q9ULJ6 1067 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 BAIAP2Q9UQB8 552 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 TVP23AA6NH52 213 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 MEN1O00255 615 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 MT-ND5P03915 603 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 GUSBP08236 651 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 CENPAP49450 140 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 DCAF7P61962 342 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 NPEPL1Q8NDH3 523 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 PLPP5Q8NEB5 264 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 NAT6Q93015 286 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 ADAMTS20P59510 1910 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 FUOMA2VDF0 154 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 MASP2O00187 686 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 GP1BBP13224 206 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 SPI1P17947 270 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 CLDN6P56747 220 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 OXA1LQ15070 435 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 UBE2J2Q8N2K1 259 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 ASB15Q8WXK1 588 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 LAT2Q9GZY6 243 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 PPIL3Q9H2H8 161 aaKnown RBP16.31■□□□□ 0.2
CAPN1-201ENST00000279247 NRIP3Q9NQ35 241 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 PLEKHB1Q9UF11 243 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-201ENST00000279247 DCTN6O00399 190 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 CD300CQ08708 224 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 FAM131AQ6UXB0 335 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 MAMSTRQ6ZN01 415 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 TMEM91Q6ZNR0 172 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 SYT9Q86SS6 491 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 CNN2Q99439 309 aaKnown RBP16.31■□□□□ 0.2
CAPN1-201ENST00000279247 MROQ9BYG7 248 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 ARRDC1-AS1Q9H2J1 176 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 EVA1AQ9H8M9 152 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 MED11Q9P086 117 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 GRHPRQ9UBQ7 328 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 COPS3Q9UNS2 423 aa16.31■□□□□ 0.2
CAPN1-201ENST00000279247 ALG1L2C9J202 215 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 ARHGEF9O43307 516 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 IL1AP01583 271 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 ANGPT1Q15389 498 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 LINC00299Q6ZSB3 139 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 CMAHPQ9Y471 501 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 SSX4O60224 188 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 RPP14O95059 124 aaKnown RBP16.3■□□□□ 0.2
CAPN1-201ENST00000279247 SHC1P29353 583 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 HOXA6P31267 233 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 PRPS1P60891 318 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 ZNF45Q02386 682 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 INPP5JQ15735 1006 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-201ENST00000279247 SLC35F2Q8IXU6 374 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 ING1Q9UK53 422 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-201ENST00000279247 A3GALT2U3KPV4 340 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 CUL9Q8IWT3 2517 aa16.3■□□□□ 0.2
CAPN1-201ENST00000279247 TAF4O00268 1085 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 TOX3O15405 576 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CELA2AP08217 269 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 PGCP20142 388 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 ADH7P40394 386 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 PSPHP78330 225 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 YOD1Q5VVQ6 348 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-201ENST00000279247 IL20RBQ6UXL0 311 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CCDC190Q86UF4 302 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 MR1Q95460 341 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 ORAI1Q96D31 301 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 ACOXLQ9NUZ1 547 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 KLRF1Q9NZS2 232 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CLEC4AQ9UMR7 237 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 A0A1B0GVC2 190 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 TRDV1A0A1B0GX56 115 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 A6NIN4 97 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SUSD5O60279 629 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 OVCH1Q7RTY7 1134 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 GPR119Q8TDV5 335 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 TAS2R10Q9NYW0 307 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SAGE2PA6NJ88 616 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CBFA2T3O75081 653 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CD14P08571 375 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SP9P0CG40 484 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SPNP16150 400 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 PNLIPP16233 465 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 TGM1P22735 817 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 MAGEB1P43366 347 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 VASH1Q7L8A9 365 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-201ENST00000279247 CEACAM19Q7Z692 300 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 ARIH2OSQ8N7S6 290 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SPSB2Q99619 263 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 PDCD1LG2Q9BQ51 273 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 ALG12Q9BV10 488 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 SYT4Q9H2B2 425 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 TMEM185BQ9H7F4 350 aa16.29■□□□□ 0.2
CAPN1-201ENST00000279247 NUP210LQ5VU65 1888 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 TMED7-TICAM2A0A0A6YYA0 188 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 H3BML4 177 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 OR2J2O76002 312 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms