RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OR2T27Q8NH04 317 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ZPLD1Q8TCW7 415 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TCEAL3Q969E4 200 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SLC25A46Q96AG3 418 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TMED9Q9BVK6 235 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 HDHD5Q9BXW7 423 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TPK1Q9H3S4 243 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GALNT8Q9NY28 637 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ASCC3Q8N3C0 2202 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TEX13CA0A0J9YWL9 993 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ANKUB1A6NFN9 424 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 A8MVM7 634 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 E9PI62 339 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GABRPO00591 440 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MAGEB3O15480 346 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SLC25A12O75746 678 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GLCEO94923 617 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TFP02787 698 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 F13BP05160 661 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TNFSF8P32971 234 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ETV6P41212 452 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 HTR3AP46098 478 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SLC25A1P53007 311 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 OR12D2P58182 307 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 EMC4Q5J8M3 183 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 FAM69BQ5VUD6 431 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 OR5M10Q6IEU7 315 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TMEM91Q6ZNR0 172 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 NANOGNBQ7Z5D8 188 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 CCDC190Q86UF4 302 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MARCH9Q86YJ5 346 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SNX29P2Q8IUI4 249 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GPALPP1Q8IXQ4 340 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GHDCQ8N2G8 530 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 PARP16Q8N5Y8 322 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 EXD3Q8N9H8 876 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SYT14Q8NB59 555 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 STK35Q8TDR2 534 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TMEM234Q8WY98 164 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MR1Q95460 341 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 LOXL4Q96JB6 756 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 DCLRE1CQ96SD1 692 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 CNN2Q99439 309 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 PTDSS2Q9BVG9 487 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 NDEL1Q9GZM8 345 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SMURF1Q9HCE7 757 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TRIM36Q9NQ86 728 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SLC39A1Q9NY26 324 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TAS2R5Q9NYW4 299 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MYOTQ9UBF9 498 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 PLEKHB1Q9UF11 243 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF346Q9UL40 294 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ZMIZ1Q9ULJ6 1067 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 PCDHGB7Q9Y5F8 929 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 IQCMA0A1B0GVH7 501 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 B4E171 279 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 PLPP2O43688 288 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 MT-ATP6P00846 226 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 CD53P19397 219 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 TSPAN7P41732 249 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 CAPZA2P47755 286 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 TGM4P49221 684 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 SUMO3P55854 103 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-201ENST00000276573 RUNX1T1Q06455 604 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 HNRNPA0Q13151 305 aaKnown RBP8.69□□□□□ -1.02
TRIM55-201ENST00000276573 PCOLCEQ15113 449 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 ANGPT1Q15389 498 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 LINC01590Q5TEZ4 76 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 GPR139Q6DWJ6 353 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 FAM198BQ6UWH4 519 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 SSX6Q7RTT6 188 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 JAZF1Q86VZ6 243 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 SLC35F2Q8IXU6 374 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 ELP5Q8TE02 316 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 ST8SIA1Q92185 356 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 PMEPA1Q969W9 287 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 SLC25A36Q96CQ1 311 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 C4orf36Q96KX1 117 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 MROQ9BYG7 248 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 DEFB126Q9BYW3 111 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 FAIMQ9NVQ4 179 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 GRHPRQ9UBQ7 328 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 USP34Q70CQ2 3546 aa8.69□□□□□ -1.02
TRIM55-201ENST00000276573 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 CD8B2A6NJW9 211 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 C4orf47A7E2U8 309 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 B4DXG7 233 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OGG1O15527 345 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 FLRT2O43155 660 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 KLF7O75840 302 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR2J2O76002 312 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 UMODP07911 640 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 FBXO45P0C2W1 286 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 CD8BP10966 210 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms