RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 A0A087WZY1 265 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 J3QRE1 110 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 EFNA2O43921 213 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 DXOO77932 396 aaKnown RBP14.79□□□□□ -0.04
TPM1-201ENST00000267996 SNX4O95219 450 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 AHSA1O95433 338 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 PAICSP22234 425 aaKnown RBP14.79□□□□□ -0.04
TPM1-201ENST00000267996 ADH6P28332 368 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 TGFBR2P37173 567 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 NOVA1P51513 510 aaKnown RBP14.79□□□□□ -0.04
TPM1-201ENST00000267996 ERVK-25P63136 954 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 SGCBQ16585 318 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 DCAF10Q5QP82 559 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 ARMC4Q5T2S8 1044 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 OR52E2Q8NGJ4 325 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 TMEM41AQ96HV5 264 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 THOC3Q96J01 351 aaKnown RBP14.79□□□□□ -0.04
TPM1-201ENST00000267996 OR5M11Q96RB7 305 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 BCL7BQ9BQE9 202 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 JAM3Q9BX67 310 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 POTEKPQ9BYX7 375 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 NDEL1Q9GZM8 345 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 PTGES2Q9H7Z7 377 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 TAS2R5Q9NYW4 299 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 ERGIC3Q9Y282 383 aa14.79□□□□□ -0.04
TPM1-201ENST00000267996 SLC22A31A6NKX4 558 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 IGHA1P01876 353 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 CTXN1P60606 82 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.78□□□□□ -0.04
TPM1-201ENST00000267996 DOC2BQ14184 412 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 EMC4Q5J8M3 183 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 MDGA2Q7Z553 956 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 ZNF227Q86WZ6 799 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 NPEPL1Q8NDH3 523 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 OR5J2Q8NH18 312 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 OR4K13Q8NH42 304 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 MFSD8Q8NHS3 518 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 NMNAT2Q9BZQ4 307 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 RACGAP1Q9H0H5 632 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 CXorf56Q9H5V9 222 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 GPN2Q9H9Y4 310 aaPredicted RBP14.78□□□□□ -0.04
TPM1-201ENST00000267996 MRPL39Q9NYK5 338 aaKnown RBP14.78□□□□□ -0.04
TPM1-201ENST00000267996 HAO2Q9NYQ3 351 aa14.78□□□□□ -0.04
TPM1-201ENST00000267996 EXOSC1Q9Y3B2 195 aaKnown RBP14.78□□□□□ -0.04
TPM1-201ENST00000267996 FAM47E-STBD1D6RA91 191 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 GABARAPO95166 117 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 ATE1O95260 518 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 LIFP15018 202 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 PCSK6P29122 969 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 GRPRP30550 384 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 LIPAP38571 399 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 EIF1P41567 113 aaKnown RBP14.77□□□□□ -0.04
TPM1-201ENST00000267996 ETV1P50549 477 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 AIMP2Q13155 320 aaKnown RBP14.77□□□□□ -0.04
TPM1-201ENST00000267996 TIGD3Q6B0B8 471 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 BEST3Q8N1M1 668 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 CYB561A3Q8NBI2 242 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 OR4F15Q8NGB8 312 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 ZBTB8AQ96BR9 441 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 DDIT4LQ96D03 193 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 Q96M85 177 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 TEAD3Q99594 435 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 ZNF649Q9BS31 505 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 MND1Q9BWT6 205 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 KLHL1Q9NR64 748 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 DLL3Q9NYJ7 618 aa14.77□□□□□ -0.04
TPM1-201ENST00000267996 TMEM129A0AVI4 362 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SHISA8B8ZZ34 492 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 PLPP3O14495 311 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 NOL3O60936 208 aaKnown RBP14.77□□□□□ -0.05
TPM1-201ENST00000267996 TRIM3O75382 744 aaPredicted RBP14.77□□□□□ -0.05
TPM1-201ENST00000267996 APOL3O95236 402 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 MYL12AP19105 171 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 IL11P20809 199 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SDHAP31040 664 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 MFSD13AQ14CX5 517 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SPHARQ15513 63 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 TGIF1Q15583 401 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 CTF1Q16619 201 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 GPR139Q6DWJ6 353 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 PAQR6Q6TCH4 344 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 ERI1Q8IV48 349 aaKnown RBP14.77□□□□□ -0.05
TPM1-201ENST00000267996 FAM98AQ8NCA5 519 aaKnown RBP14.77□□□□□ -0.05
TPM1-201ENST00000267996 SDR9C7Q8NEX9 313 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 KIAA1143Q96AT1 154 aaPredicted RBP14.77□□□□□ -0.05
TPM1-201ENST00000267996 OTULINQ96BN8 352 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SLC25A36Q96CQ1 311 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 ARL5BQ96KC2 179 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 FER1L6-AS2Q96M78 137 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 MGLLQ99685 303 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SERINC1Q9NRX5 453 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 SEC14L4Q9UDX3 406 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 CORINQ9Y5Q5 1042 aa14.77□□□□□ -0.05
TPM1-201ENST00000267996 DMXL1Q9Y485 3027 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 CEP250Q9BV73 2442 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 TEX13CA0A0J9YWL9 993 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 SLC30A4O14863 429 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 F13BP05160 661 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 LIMS3P0CW19 117 aa14.76□□□□□ -0.05
TPM1-201ENST00000267996 LIMS4P0CW20 117 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms