RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 HOXB9P17482 250 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 PTNP21246 168 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 MPGP29372 298 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 TTKP33981 857 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 ACVR1BP36896 505 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 ZNF83P51522 516 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 P2RY4P51582 365 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 CDH11P55287 796 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 TGFBR3Q03167 851 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 KRTAP1-1Q07627 177 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 VEZF1Q14119 521 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 OR7A5Q15622 319 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 RPS26P11Q5JNZ5 115 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 C1QTNF12Q5T7M4 302 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 C9orf135Q5VTT2 229 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 AGAP6Q5VW22 663 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 PRAMEF8Q5VWM4 474 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 PRAMEF7Q5VXH5 474 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 SLC2A7Q6PXP3 512 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 SLC22A25Q6T423 547 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 AAED1Q7RTV5 226 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 SERPINA11Q86U17 422 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 C1orf162Q8NEQ5 155 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 OR9K2Q8NGE7 335 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 MAL2Q969L2 176 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 ZNF837Q96EG3 531 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 BOD1Q96IK1 185 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 C7orf26Q96N11 449 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 DHRS9Q9BPW9 319 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 RSPO3Q9BXY4 272 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 REG4Q9BYZ8 158 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 PAIP1Q9H074 479 aaKnown RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 ARMC7Q9H6L4 198 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 A4GALTQ9NPC4 353 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 UPB1Q9UBR1 384 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
VPS41-201ENST00000265745 B3GALT5Q9Y2C3 310 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 IFT52Q9Y366 437 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 FREM1Q5H8C1 2179 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
VPS41-201ENST00000265745 A0A096LPI6 279 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 VAMP5O95183 116 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 ETS2P15036 469 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 NCF2P19878 526 aaPredicted RBP8.52□□□□□ -1.05
VPS41-201ENST00000265745 PPP2R2BQ00005 443 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 HOXC5Q00444 222 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SPOCK1Q08629 439 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 FADDQ13158 208 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 ZNF311Q5JNZ3 666 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 LRIF1Q5T3J3 769 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 AGBL2Q5U5Z8 902 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 C1orf140Q5VVS0 124 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 TMEM225Q6GV28 225 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 CREB3L2Q70SY1 520 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 FUNDC1Q8IVP5 155 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 MSRB3Q8IXL7 192 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 MAPK1IP1LQ8NDC0 245 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 STK35Q8TDR2 534 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLC35B4Q969S0 331 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 C3orf49Q96BT1 292 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 HS6ST2Q96MM7 605 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 RAD21L1Q9H4I0 556 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 BARX1Q9HBU1 254 aaPredicted RBP8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLCO1B3Q9NPD5 702 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLC52A3Q9NQ40 469 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 TCF7L2Q9NQB0 619 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLC17A5Q9NRA2 495 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 CBLN4Q9NTU7 201 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 ADPRHL2Q9NX46 363 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLC25A37Q9NYZ2 338 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 SLAMF8Q9P0V8 285 aa8.52□□□□□ -1.05
VPS41-201ENST00000265745 RAI1Q7Z5J4 1906 aaPredicted RBP8.52□□□□□ -1.05
VPS41-201ENST00000265745 FTCDNL1E5RQL4 147 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 M0R1B8 84 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 FRS3O43559 492 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 PRPS1P60891 318 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 IRX1P78414 480 aaPredicted RBP8.51□□□□□ -1.05
VPS41-201ENST00000265745 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 EGR4Q05215 589 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 ZNF544Q6NX49 715 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 B3GLCTQ6Y288 498 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 JAZF1Q86VZ6 243 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 EPHX4Q8IUS5 362 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 MUC15Q8N387 334 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 MFSD8Q8NHS3 518 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 SPDL1Q96EA4 605 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 KTI12Q96EK9 354 aaPredicted RBP8.51□□□□□ -1.05
VPS41-201ENST00000265745 EBF4Q9BQW3 602 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 CCDC28BQ9BUN5 200 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 PTDSS2Q9BVG9 487 aa8.51□□□□□ -1.05
VPS41-201ENST00000265745 TAPBPLQ9BX59 468 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms