RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GYPBP06028 91 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 ZNF19P17023 458 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 PITPNBP48739 271 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 GDI2P50395 445 aaKnown RBP10.15□□□□□ -0.78
MSH3-201ENST00000265081 ZNF117Q03924 483 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 SHBQ15464 509 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 SLC25A35Q3KQZ1 300 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 COX15Q7KZN9 410 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 OR4M2Q8NGB6 313 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 THAP4Q8WY91 577 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 NMNAT3Q96T66 252 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 KLHDC3Q9BQ90 382 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 TPSD1Q9BZJ3 242 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 UBE2ZQ9H832 354 aaPredicted RBP10.15□□□□□ -0.78
MSH3-201ENST00000265081 UCKL1Q9NWZ5 548 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 RASD1Q9Y272 281 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 SMIM30A4D0T7 59 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 PIN1P1O15428 100 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 FADS1O60427 444 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 AHCYP23526 432 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 GPLD1P80108 840 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 YIF1BQ5BJH7 314 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 ARL9Q6T311 187 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 CBLN3Q6UW01 205 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 CADM2Q8N3J6 435 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 ZNF501Q96CX3 271 aaPredicted RBP10.15□□□□□ -0.78
MSH3-201ENST00000265081 ZMYND19Q96E35 227 aaPredicted RBP10.15□□□□□ -0.78
MSH3-201ENST00000265081 WACQ9BTA9 647 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 LRRN3E7EW58 273 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 PNLIPP16233 465 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 RAB3BP20337 219 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 GBX2P52951 348 aaPredicted RBP10.15□□□□□ -0.79
MSH3-201ENST00000265081 DBPQ10586 325 aaPredicted RBP10.15□□□□□ -0.79
MSH3-201ENST00000265081 PON3Q15166 354 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 MESTQ5EB52 335 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 PYHIN1Q6K0P9 492 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 MZT2BQ6NZ67 158 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 SEZ6L2Q6UXD5 910 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 SMAP2Q8WU79 429 aaPredicted RBP10.15□□□□□ -0.79
MSH3-201ENST00000265081 NACC2Q96BF6 587 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 TSPAN32Q96QS1 320 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 NUDT9Q9BW91 350 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 DUSP15Q9H1R2 295 aaPredicted RBP10.15□□□□□ -0.79
MSH3-201ENST00000265081 LRRN3Q9H3W5 708 aa10.15□□□□□ -0.79
MSH3-201ENST00000265081 LANCL1O43813 399 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 ANKRD34CP0C6C1 535 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 PRKAR1AP10644 381 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 IL18Q14116 193 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 GATAD2AQ86YP4 633 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 TMEM151BQ8IW70 566 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 OR1N1Q8NGS0 311 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 ZNF519Q8TB69 540 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 HSD17B8Q92506 261 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 RASD2Q96D21 266 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 LPAR4Q99677 370 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 EXTL2Q9UBQ6 330 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 WNT16Q9UBV4 365 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 MRTO4Q9UKD2 239 aaKnown RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 SPATA2Q9UM82 520 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 SELENOFO60613 162 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 GLB1P16278 677 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 ATF1P18846 271 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 PGDP52209 483 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 HCCSP53701 268 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 PNLIPRP2P54317 469 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 TAB1Q15750 504 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 EEF1A1P5Q5VTE0 462 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 SLC35F3Q8IY50 421 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 FAM98AQ8NCA5 519 aaKnown RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 MRPL48Q96GC5 212 aaKnown RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 ART5Q96L15 291 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 WWTR1Q9GZV5 400 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 OR10H1Q9Y4A9 318 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 B3GALT1Q9Y5Z6 326 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 C7orf66A4D0T2 115 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 FAM172BPA6NC97 362 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 K7ESF4 209 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 SCDO00767 359 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 ICOSLGO75144 302 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 UBL3O95164 117 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 SCAND1P57086 179 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 NANOS3P60323 173 aaKnown RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 TNK1Q13470 666 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 DEFB133Q30KQ1 61 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 TP53I3Q53FA7 332 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 IDNKQ5T6J7 187 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 TRMT10AQ8TBZ6 339 aaKnown RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 TSLPQ969D9 159 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 FANCFQ9NPI8 374 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 VSX1Q9NZR4 365 aaPredicted RBP10.14□□□□□ -0.79
MSH3-201ENST00000265081 F5P12259 2224 aa10.14□□□□□ -0.79
MSH3-201ENST00000265081 TRBV5-7A0A0A0MS05 114 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TTLL8A6PVC2 850 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TMEM150CB9EJG8 249 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ARL6IP5O75915 188 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 PYCR1P32322 319 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 RPS7P62081 194 aaKnown RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 EGR3Q06889 387 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms