RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PELI2Q9HAT8 420 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CPNE5Q9HCH3 593 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 NCBP2LA6PVI3 153 aaKnown RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 G3V3Y1 287 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 H3BQ06 376 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 MITFO75030 526 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 RGS11O94810 467 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CA5AP35218 305 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 TECRLQ5HYJ1 363 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 RHEBL1Q8TAI7 183 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 FGGYQ96C11 551 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 MAF1Q9H063 256 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 FAM189BP81408 668 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 HMGN3Q15651 99 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 BATF2Q8N1L9 274 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 RAB3CQ96E17 227 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 PEBP4Q96S96 227 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 PIRO00625 290 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 HOXD12P35452 270 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 C18orf63Q68DL7 685 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 TCTE3Q8IZS6 198 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 NAGSQ8N159 534 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 ASB17Q8WXJ9 295 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 IGSF8Q969P0 613 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 APIPQ96GX9 242 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 RASD1Q9Y272 281 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 DUOX1Q9NRD9 1551 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 DRD1P21728 446 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CARD18P57730 90 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 PHLDA2Q53GA4 152 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 PSAPL1Q6NUJ1 521 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 NLRC3Q7RTR2 1065 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 TSPYL5Q86VY4 417 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CPXM2Q8N436 756 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 ZDHHC24Q6UX98 284 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 OR10AD1Q8NGE0 317 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF582Q96NG8 517 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 OR6C1Q96RD1 312 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 SORBS1Q9BX66 1292 aaKnown RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 IL23AQ9NPF7 189 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 SRPK3Q9UPE1 567 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CBY3A6NI87 242 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 OR52A4PA6NMU1 304 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 DDAH2O95865 285 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ENPP1P22413 925 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PBX1P40424 430 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 MEOX1P50221 254 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PPP2CAP67775 309 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF626Q68DY1 528 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ADGRG3Q86Y34 549 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SLC35B2Q8TB61 432 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SLC41A2Q96JW4 573 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 DDX31Q9H8H2 851 aaKnown RBP10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ABCD4O14678 606 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 UPK1BO75841 260 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ABHD16AO95870 558 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 GABRA5P31644 462 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 HOXC5Q00444 222 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ST8SIA2Q92186 375 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SOX7Q9BT81 388 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 NUDT9Q9BW91 350 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 TMEM235A6NFC5 223 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 GOSR1O95249 250 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 LBX1P52954 281 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 CLDN8P56748 225 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 GALEQ14376 348 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 CPEB3Q8NE35 698 aaKnown RBP10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SCPEP1Q9HB40 452 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 UNC50Q53HI1 259 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 OR10K2Q6IF99 312 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 MOB1AQ9H8S9 216 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PGAP2Q9UHJ9 254 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 DEGS1O15121 323 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 F13BP05160 661 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 PGGT1BP53609 377 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 TIFABQ6ZNK6 161 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 IGDCC3Q8IVU1 814 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ZADH2Q8N4Q0 377 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SLC15A4Q8N697 577 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 RAB7AP51149 207 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 GLYR1Q49A26 553 aaPredicted RBP10.61□□□□□ -0.71
PTPN4-201ENST00000263708 TMPRSS11FQ6ZWK6 438 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 NHLRC2Q8NBF2 726 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 B3GNT7Q8NFL0 401 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 HAVCR2Q8TDQ0 301 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 IMP4Q96G21 291 aaKnown RBP10.61□□□□□ -0.71
PTPN4-201ENST00000263708 MBOAT4Q96T53 435 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ARPC5LQ9BPX5 153 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 SPP1P10451 314 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 ACTBL2Q562R1 376 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
PTPN4-201ENST00000263708 M0QZ24 198 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms