RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SERINC4A6NH21 518 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 PRKNO60260 465 aaPredicted RBP11.97□□□□□ -0.49
SGCA-201ENST00000262018 BCAS1O75363 584 aaPredicted RBP11.97□□□□□ -0.49
SGCA-201ENST00000262018 GOSR1O95249 250 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 LYPD3O95274 346 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 IGHG3P01860 377 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 GKN3PP0CG01 181 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 OSMP13725 252 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 PRG2P13727 222 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 POU2F1P14859 743 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 HTR2AP28223 471 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 CRISP1P54107 249 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 CXCR4P61073 352 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 PSPHP78330 225 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 IL5RAQ01344 420 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 COX10Q12887 443 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 CDK5R2Q13319 367 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 OR1Q1Q15612 314 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 HLA-DQA1Q5Y7H0 255 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 LAIR2Q6ISS4 152 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 ZER1Q7Z7L7 766 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 PSD4Q8NDX1 1056 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 ZNF420Q8TAQ5 688 aaPredicted RBP11.97□□□□□ -0.49
SGCA-201ENST00000262018 ACOT11Q8WXI4 607 aaPredicted RBP11.97□□□□□ -0.49
SGCA-201ENST00000262018 PIGTQ969N2 578 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 ZNF566Q969W8 418 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 TTTY12Q9BZ98 90 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 WWTR1Q9GZV5 400 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 LDAHQ9H6V9 325 aa11.97□□□□□ -0.49
SGCA-201ENST00000262018 A0A0G2JMM0 328 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 A0A1B0GVC2 190 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 A0A1W2PPB8 328 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 A0A1W2PRS3 328 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ZAR1LA6NP61 321 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 KIR3DP1A8MWS1 328 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 G3V3Y1 287 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 AQP7O14520 342 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 TSPAN2O60636 221 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ITGA10O75578 1167 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 GABRA1P14867 456 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 CRHBPP24387 322 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 IFNGR2P38484 337 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ACAA2P42765 397 aaKnown RBP11.96□□□□□ -0.49
SGCA-201ENST00000262018 MAGEA5P43359 124 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ALDH3B2P48448 385 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 MAD2L1BPQ15013 274 aaPredicted RBP11.96□□□□□ -0.49
SGCA-201ENST00000262018 KLHL26Q53HC5 615 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ZNF613Q6PF04 617 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 NKAIN4Q8IVV8 208 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 TMEM251Q8N6I4 163 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 ZNF614Q8N883 585 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 OR4C3Q8NH37 302 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 GNPDA2Q8TDQ7 276 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 TP53INP1Q96A56 240 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 SARAFQ96BY9 339 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 EFHD2Q96C19 240 aaPredicted RBP11.96□□□□□ -0.49
SGCA-201ENST00000262018 PRSS27Q9BQR3 290 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 EXO5Q9H790 373 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 UBQLN4Q9NRR5 601 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 SLC35A3Q9Y2D2 325 aa11.96□□□□□ -0.49
SGCA-201ENST00000262018 YARS2Q9Y2Z4 477 aaKnown RBP11.96□□□□□ -0.49
SGCA-201ENST00000262018 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 WWP2O00308 870 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 OR2J2O76002 312 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
SGCA-201ENST00000262018 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
SGCA-201ENST00000262018 CCDC159P0C7I6 412 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 ATP6V1B1P15313 513 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 GSTM3P21266 225 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 TBXA2RP21731 343 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 CHMP24386 653 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 GSSP48637 474 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 RNF144AP50876 292 aaPredicted RBP11.95□□□□□ -0.5
SGCA-201ENST00000262018 SSR4P51571 173 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 CDH15P55291 814 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 TEKQ02763 1124 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 DYNC1I2Q13409 638 aaKnown RBP11.95□□□□□ -0.5
SGCA-201ENST00000262018 PTGES3Q15185 160 aaKnown RBP11.95□□□□□ -0.5
SGCA-201ENST00000262018 FNDC7Q5VTL7 733 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 MBOAT2Q6ZWT7 520 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 ZNF440Q8IYI8 595 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 DEPDC4Q8N2C3 294 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 FAM109AQ8N4B1 249 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 SLC15A4Q8N697 577 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 LSMEM1Q8N8F7 131 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 ZNF527Q8NB42 609 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 NAXEQ8NCW5 288 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 PIGXQ8TBF5 258 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 TRIM2Q9C040 744 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 TMEM27Q9HBJ8 222 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
SGCA-201ENST00000262018 SLC7A7Q9UM01 511 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms