RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PTGER4P35408 488 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 APOBEC1P41238 236 aaKnown RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ADORA2A-AS1P86434 159 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 COX10Q12887 443 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 EXOC3L2Q2M3D2 409 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 OTUD3Q5T2D3 398 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 C3orf33Q6P1S2 294 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 TTC33Q6PID6 262 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 C5orf46Q6UWT4 87 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 RPTNQ6XPR3 784 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 B3GNT6Q6ZMB0 384 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF730Q6ZMV8 503 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ADGRG3Q86Y34 549 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ALDH16A1Q8IZ83 802 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ATG16L2Q8NAA4 619 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ATP6V1C2Q8NEY4 427 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 OR10G2Q8NGC3 310 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 PIGXQ8TBF5 258 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 MAGEE2Q8TD90 523 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 C3orf49Q96BT1 292 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 KLHL15Q96M94 604 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 TRIB1Q96RU8 372 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF184Q99676 751 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 TTYH2Q9BSA4 534 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ADAM19Q9H013 955 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 Q9H521 79 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 RHCGQ9UBD6 479 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 OSGIN1Q9UJX0 560 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 GDF2Q9UK05 429 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 SLC7A7Q9UM01 511 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM5Q9Y2B1 443 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 POLEQ07864 2286 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ESPL1Q14674 2120 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 NBASA2RRP1 2371 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 A0A087WUJ7 227 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TMED7-TICAM2A0A0A6YYA0 188 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM72A0PK05 275 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ELOA3DA6NLF2 546 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 CLCA1A8K7I4 914 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TNFSF11O14788 317 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 OR10H3O60404 316 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ADAP00813 363 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 IGF2P01344 180 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ALPLP05186 524 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 HOXD4P09016 255 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 GLI4P10075 376 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 BMP4P12644 408 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 CCNA2P20248 432 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TACR3P29371 465 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 POLR2HP52434 150 aaKnown RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 NUP107P57740 925 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 PPP2R2BQ00005 443 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TAF11Q15544 211 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ELOA3BQ3SY89 546 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM176BQ3YBM2 270 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 NSUN5P2Q63ZY6 315 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 FAHD1Q6P587 224 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 PODNL1Q6PEZ8 512 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ESPNLQ6ZVH7 1005 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 MBOAT2Q6ZWT7 520 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ELOA3Q8NG57 546 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 SLC7A13Q8TCU3 470 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM239Q8WW34 195 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF845Q96IR2 970 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 FUZQ9BT04 418 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 SERINC1Q9NRX5 453 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 SMPD3Q9NY59 655 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-201ENST00000261813 CLCF1Q9UBD9 225 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 CHRNA9Q9UGM1 479 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 POFUT2Q9Y2G5 429 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 TMED7Q9Y3B3 224 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 MED31Q9Y3C7 131 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 GTF3C1Q12789 2109 aa10.37□□□□□ -0.75
PFDN1-201ENST00000261813 KIAA1549Q9HCM3 1950 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 CD8B2A6NJW9 211 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 PDLIM1O00151 329 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 SOCS2O14508 198 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 EI24O14681 340 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 ZG16O60844 167 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 TOXO94900 526 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 IGFBP5P24593 272 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 CXCR1P25024 350 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 IST1P53990 364 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 UGT2B15P54855 530 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 RPS3AP61247 264 aaKnown RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 PMPCAQ10713 525 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 SYT14P1Q58G82 188 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM211Q6ICI0 200 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 C1orf94Q6P1W5 598 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 IZUMO2Q6UXV1 221 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 ATG4DQ86TL0 474 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 TSPYL5Q86VY4 417 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 EPHX4Q8IUS5 362 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 GALNT4Q8N4A0 578 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms