RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CST6Q15828 149 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 GSG1LQ6UXU4 331 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 TTLQ8NG68 377 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 OR2L3Q8NG85 312 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 HCAR2Q8TDS4 363 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 PPP1R14AQ96A00 147 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MS4A4EQ96PG1 132 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 ADOQ96SZ5 270 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MARVELD1Q9BSK0 173 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 PPP1R3EQ9H7J1 279 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CA10Q9NS85 328 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CLDND1Q9NY35 253 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 LCTP09848 1927 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MAN2B1O00754 1011 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 VEGFDO43915 354 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 KNG1P01042 644 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 IGF2P01344 180 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CXCR1P25024 350 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CXADRP78310 365 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 IRF5Q13568 498 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 KRBOX4Q5JUW0 171 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 FIGLAQ6QHK4 219 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MARCH3Q86UD3 253 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 BPHLQ86WA6 291 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 BATF2Q8N1L9 274 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 OR10R2Q8NGX6 335 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 FCRL1Q96LA6 429 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 NUDT22Q9BRQ3 303 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 TO15178 435 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CASC3O15234 703 aaKnown RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 NDUFB2O95178 105 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 APBB3O95704 486 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 F12P00748 615 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 APODP05090 189 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MTNR1BP49286 362 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 NR0B1P51843 470 aaKnown RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 HMGA2P52926 109 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 TAS2R43P59537 309 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 SLC7A9P82251 487 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 GK2Q14410 553 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 HNF4GQ14541 408 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 SLC9A3R2Q15599 337 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 ZNF770Q6IQ21 691 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 MFSD12Q6NUT3 480 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 Q6ZNB5 142 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 USP53Q70EK8 1073 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 ZAR1Q86SH2 424 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 LINC00346Q8IVM7 164 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CSNK1A1LQ8N752 337 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 SDC3O75056 442 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 ATP1B1P05026 303 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SLC2A1P11166 492 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 PRSS3P35030 304 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 CCR9P51686 369 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 CDK5Q00535 292 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 C1orf189Q5VU69 101 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 KIAA1211LQ6NV74 962 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 IDO2Q6ZQW0 420 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 LRRC46Q96FV0 321 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SDF2Q99470 211 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 ARPC5LQ9BPX5 153 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 NXF2Q9GZY0 626 aaKnown RBP9.31□□□□□ -0.92
PALB2-201ENST00000261584 FGF22Q9HCT0 170 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 Q9N2J8 555 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 ACSS1Q9NUB1 689 aaPredicted RBP9.31□□□□□ -0.92
PALB2-201ENST00000261584 SAGE1Q9NXZ1 904 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 hCG_1807616A0A1W2PRN6 198 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 TXNL1O43396 289 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 FGF17O60258 216 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SC5DO75845 299 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
PALB2-201ENST00000261584 SEMG1P04279 462 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 TACSTD2P09758 323 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 ZNF823P16415 610 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SLC2A5P22732 501 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 FPR3P25089 353 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 DLSTP36957 453 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 AIMP2Q13155 320 aaKnown RBP9.31□□□□□ -0.92
PALB2-201ENST00000261584 NFATC4Q14934 902 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 MPP7Q5T2T1 576 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 LIPNQ5VXI9 398 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 LAMTOR1Q6IAA8 161 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SLC48A1Q6P1K1 146 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 OR2A1Q8NGT9 310 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 DGAT2Q96PD7 388 aa9.31□□□□□ -0.92
PALB2-201ENST00000261584 SLC17A9Q9BYT1 436 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms