RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 Q8N402 240 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF676Q8N7Q3 588 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 OR51A4Q8NGJ6 313 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 TSEN15Q8WW01 171 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 MOAP1Q96BY2 351 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 GNRHR2Q96P88 292 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ARHGDIGQ99819 225 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 FBRSQ9HAH7 460 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ING3Q9NXR8 418 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 PISDQ9UG56 409 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 EML6Q6ZMW3 1958 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CACNA1AO00555 2505 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 FAM240BA0A1B0GVZ2 78 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 KLHL33A6NCF5 533 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SRPX2O60687 465 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 KCNJ13O60928 360 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 NSA2O95478 260 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 TFP02787 698 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CALCBP10092 127 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 FPR3P25089 353 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ACAA2P42765 397 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 GPR3P46089 330 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 RELAQ04206 551 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 FZD5Q13467 585 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ACSM3Q53FZ2 586 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 KIAA2026Q5HYC2 2103 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 MEPCEQ7L2J0 689 aaKnown RBP8.3□□□□□ -1.08
CKAP2-201ENST00000258607 NATD1Q8N6N6 113 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 OR8S1Q8NH09 359 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CCDC74BQ96LY2 380 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 DOK1Q99704 481 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 CHIAQ9BZP6 476 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 ARRDC1-AS1Q9H2J1 176 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 LYRM4Q9HD34 91 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 AKIP1Q9NQ31 210 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 SLC22A13Q9Y226 551 aa8.3□□□□□ -1.08
CKAP2-201ENST00000258607 NUP210Q8TEM1 1887 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF106Q9H2Y7 1883 aaKnown RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 A0A1W2PR77 199 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 DCDC2BA2VCK2 349 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ASNA1O43681 348 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 IFNGP01579 166 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 HMGN1P05114 100 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 SMIM10L1P0DMW3 83 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 S1PR1P21453 382 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 SLC6A6P31641 620 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CCKBRP32239 447 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 PPP5CP53041 499 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 RPL18Q07020 188 aaKnown RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ELOAQ14241 798 aaKnown RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 B3GNTL1Q67FW5 361 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 NIPAL3Q6P499 406 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ULK3Q6PHR2 472 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 GDPD3Q7L5L3 318 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 TIGD4Q8IY51 512 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 POMGNT2Q8NAT1 580 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 OR10G3Q8NGC4 313 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 OR6C4Q8NGE1 309 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 TAAR8Q969N4 342 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF566Q969W8 418 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 C3orf49Q96BT1 292 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 DTNBP1Q96EV8 351 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 SCARF2Q96GP6 870 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 SMIM10Q96HG1 83 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 MCCC2Q9HCC0 563 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 OSGIN1Q9UJX0 560 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 RARRES3Q9UL19 164 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 TSC22D4Q9Y3Q8 395 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 NDUFB2O95178 105 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CDAP32320 146 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CCR5P51681 352 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 DEFA1P59665 94 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 DEFA3P59666 94 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 QPRTQ15274 297 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CROCCP3Q8IVE0 287 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 SPEM1Q8N4L4 309 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 FAM26EQ8N5C1 309 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 TMEM156Q8N614 296 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 OR5H6Q8NGV6 325 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CRELD1Q96HD1 420 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 OR5B2Q96R09 309 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-201ENST00000258607 LPAR4Q99677 370 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 UBQLN4Q9NRR5 601 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 IL20Q9NYY1 176 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 KCNG2Q9UJ96 466 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 CMAHPQ9Y471 501 aa8.29□□□□□ -1.08
CKAP2-201ENST00000258607 TRIM64A6NGJ6 449 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 TNFSF14O43557 240 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 UPK1BO75841 260 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 SBK2P0C263 348 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 MSL3P1P0C860 447 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 IL7P13232 177 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 GNALP38405 381 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 OR2B6P58173 313 aa8.28□□□□□ -1.08
CKAP2-201ENST00000258607 COL28A1Q2UY09 1125 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms