RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TIAF1O95411 115 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 GPANK1O95872 356 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 DSG2Q14126 1118 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 IDNKQ5T6J7 187 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 AADACL4Q5VUY2 407 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 FAM199XQ6PEV8 388 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 FAM109AQ8N4B1 249 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 ACBD7Q8N6N7 88 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC38A9Q8NBW4 561 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF524Q96C55 264 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 G6PC3Q9BUM1 346 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 GON7Q9BXV9 100 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 TBL1XR1Q9BZK7 514 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 NTMQ9P121 344 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 HCN1O60741 890 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 UTS2O95399 124 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF3P17036 446 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 TMEM201Q5SNT2 666 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 CD300LDQ6UXZ3 194 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 RTL4Q6ZR62 310 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 CEP76Q8TAP6 659 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 MED30Q96HR3 178 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 TEAD3Q99594 435 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 TRIM2Q9C040 744 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 MRPL15Q9P015 296 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 ING1Q9UK53 422 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 SIRT4Q9Y6E7 314 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 PCNX3Q9H6A9 2034 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 TVP23AA6NH52 213 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 FABP7O15540 132 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 CHP2O43745 196 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF250P15622 560 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ARSBP15848 533 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ENPP1P22413 925 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 HSD17B7P56937 341 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 PLCXD2Q0VAA5 305 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ULK3Q6PHR2 472 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 SGTBQ96EQ0 304 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 Q96M85 177 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 MOGAT1Q96PD6 335 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 RBFOX1Q9NWB1 397 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ANKRD61A6NGH8 418 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 LILRA5A6NI73 299 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 IDSB3KWA1 339 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 E2F1Q01094 437 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 MEPCEQ7L2J0 689 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 OR4M2Q8NGB6 313 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ASB6Q9NWX5 421 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 WNT16Q9UBV4 365 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 VDAC3Q9Y277 283 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 GSTK1Q9Y2Q3 226 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 I3L521 148 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 AKAP8O43823 692 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 HLA-DQA2P01906 255 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 CPEP16870 476 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 DRD5P21918 477 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 RORAP35398 523 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 AGFG1P52594 562 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 FCN2Q15485 313 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 BICRALQ6AI39 1079 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 SSX6Q7RTT6 188 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF687Q8N1G0 1237 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 VN1R1Q9GZP7 353 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 TMEM185BQ9H7F4 350 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 NANSQ9NR45 359 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 GPR27Q9NS67 375 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNF223Q9UK11 482 aaPredicted RBP13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 SLC6A5Q9Y345 797 aa13.38□□□□□ -0.27
TRAFD1-201ENST00000257604 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 SELENOFO60613 162 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 RAD1O60671 282 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 AK1P00568 194 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 UBL4AP11441 157 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 GLB1P16278 677 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 COL19A1Q14993 1142 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 NIPAL3Q6P499 406 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 TCTE3Q8IZS6 198 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 BMPERQ8N8U9 685 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 DUSP19Q8WTR2 217 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 ZNRF4Q8WWF5 429 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 SMPDL3BQ92485 455 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 CHRDQ9H2X0 955 aa13.37□□□□□ -0.27
TRAFD1-201ENST00000257604 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms